Solanum pennellii: 107031038
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Entry
107031038 CDS
T04130
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
spen
Solanum pennellii
Pathway
spen00040
Pentose and glucuronate interconversions
spen01100
Metabolic pathways
Module
spen_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107031038
Enzymes [BR:
spen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
107031038
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107031038
NCBI-ProteinID:
XP_015087721
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Position
1:92167310..92172633
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AA seq
425 aa
AA seq
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MLFRILFIVLLATSLFATSCNGKKKIGKPIKHGHVKKRTQAIIDIQSFGAKGDGISDDTQ
AFIKAWKKTCKTENGVLLIPRHKIYYIGPIKFHGPCKKGLRMMINGELRASKDISDYNED
KRHWLLFQNMENFIVEGVGSIDGNGQIWWKNSCKVDKTIPCNTKTLTVPTAMSFYNCTNL
KVRNLGFKNPQKMHLTITKSELVEVSRLKITAPYDSPNTDGIHVSGTKDIDIHHSYIETG
DDCISIVNGSTNVRARYIHCGPGHGISIGSLGKNKEEDVVSNIYVHDATLRGTTNGLRIK
SWQGGRGYAKDILFQNIQMVNVTNPIIIDQYYCDQDKPCKEQKDAVRVSNIMFKNIKGTS
FTQTAIKLKCSRTVPCRGIQMENVNIRHEGGLTVKALCTNVKYTTKGVLFPKCPSEPHPL
SFLRN
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgctttttagaattctctttatagtattattagccacttcattgtttgcaacttcttgt
aatggaaaaaagaagattggaaaaccaataaaacatggtcatgtgaaaaagaggacacaa
gcaattattgatatacaatcttttggagccaaaggtgatggaatttcagatgatacacag
gcatttataaaggcttggaagaagacatgcaaaactgaaaatggtgtgcttttaattcca
agacacaaaatatattacattggaccaattaagtttcatggtccttgtaagaaaggactt
agaatgatgataaatggagaactaagagcttcaaaagatatatcagattataatgaagat
aaaagacattggcttttattccaaaatatggaaaattttatagttgaaggtgttggaagt
attgatggcaatggacaaatatggtggaaaaactcttgcaaagttgataaaactattcca
tgcaatacaaaaacactaacagttccaactgctatgtccttttataattgtacaaatttg
aaagtgagaaatttagggtttaaaaatccacaaaaaatgcacttaacaattacaaaaagt
gaacttgttgaagtttcaagattgaaaattacagcaccttatgatagcccaaacactgat
ggaattcatgtttcggggacaaaagatattgatattcaccattcatatattgaaacaggt
gatgattgtatctcaatagtaaatggatccactaatgttagagcaagatatatacattgt
ggacctggccatggaataagtattggaagcttgggtaaaaataaagaggaggatgttgtt
tcaaatatttatgtacatgatgctacattgaggggaacaactaatggattaagaataaag
tcttggcagggaggacgtggatatgcaaaagacattctttttcaaaatatacagatggtg
aatgtgaccaaccccataatcattgatcaatattattgtgaccaagataaaccatgcaaa
gagcagaaagatgcagtgcgtgtgagtaatataatgttcaaaaatataaagggaacgagt
ttcacacaaactgcaattaaattaaaatgcagcagaactgttccatgcagagggatacaa
atggaaaatgtgaatatacgtcacgaaggaggtttaactgtcaaagctttatgtacaaat
gttaaatacacaacaaagggggtgttattcccaaaatgcccttccgagccgcacccgttg
tcatttttgcggaattaa
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