Solanum pennellii: 107031102
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Entry
107031102 CDS
T04130
Name
(RefSeq) CLIP-associated protein-like
KO
K16578
CLIP-associating protein 1/2
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spen03036
]
107031102
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
spen04812
]
107031102
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
107031102
Cytoskeleton proteins [BR:
spen04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
107031102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
Vac14_Fab1_bd
HEAT_2
HEAT_EZ
TOR1L1_N
Adaptin_N
PDS5
Cnd1
HEAT_Maestro
INTS1_R4
UTP20
Sec7-like_HUS
MMS19_C
Tti2
MMS19_N
mTOR_dom
INTS7_N
SEN1_N
Dopey_N
DUF6279
Motif
Other DBs
NCBI-GeneID:
107031102
NCBI-ProteinID:
XP_015087811
LinkDB
All DBs
Position
9:complement(70867075..70882656)
Genome browser
AA seq
1429 aa
AA seq
DB search
MEEALELARAKDTKERMAGVERLHELLEASRKSLSSSEVTSLVDVCIDLLKDNNFRVCQG
ALQSLDSAAVLSGEHFKLHFNALVPAVVERLGDAKQPVRDAARRLLLTLMQVSSPTIIVE
RAGSYAWMHRSFRVREEFARTVTSAIGLFASTELPLQRTILPPILQMLSDPNPGVRDAAV
SCIEEMYSQAGPQFRDELQRHHLPTMMLKDINARLEKIEPKNPLADGVSRNYAATEVRST
GLNPKKSSPKAKNSTREVSLFGGDADITEKPVEPIKVYSEKELVREFEKIASTLVPEKDW
SIRISAMQRIEALVIGGATDFPCFRGLLKQLVVPLSTQLSDRRSTIVKQACHLLNFLSKE
LLGDFEACAEMFIPVLFKLVVITVLVIAESADTCIKTMLRNCKVARALPRIADCAKNDRN
AVLRARCCEYALLILEHWPDASEIHRSAELYEDLIKCCVGDAMSEVRSTARTLYRMFART
WPERSRRLFMSFDPVIQRIINEEDGGTHRRHASPSVRERSSHFSLGSQTSASSQISGYGT
SAIVAMDRSSSLPSGTSLSTGLLLSQTKPVGTGTERSLESVLHASKQKVSAIESLLKGLD
MSERSRSSSLDLGVDPPSSRDPPFPLAVPASNSLANALVDAPSGFSKGKNRNGGLGLSDI
ITQIQASKDSTKSSYRGSAVHESFSGLNSYSARRASEKLPDRGFVEDNAELREGRRLMNS
HVHRQYIESPYKDANFRDSHYNHVPNFQRPLSRKNTAGRMSSSKRRSFDDSQLPLGEMSS
YVEGPASLSDALSEGLSSSSDWNARVAAFSYVRSLLQQGPRGFPEIMQSFEKVMKLFFQH
LDDPHHKVAQAALSTLADLIPACRKPFESYMERILPHVFSRLIDPKESVRQPCSTTLEIV
SKTYGIDSLLPALLRSLDEQRSPKAKLAVIEFSIGSFNKHPSNSEGAGNSGILKLWLAKL
TPLVYDKNTKLKEAAISCIISVYTHFDGTGVLNFILSLSVEEQNSLRRALKQYTPRIEVD
LMNFLQNKKERQRSKYDPYDVTGTSSEEGYVGASKKNNLFGRYSAGSVDSDGARKWNSVP
DPTYMASSVGHSLSDDTQDFYHGVETGANSDFTVSKAKDSKLLALTASGSDELWANSQKS
NDDSLNMEHTSTTRLEVNGLVDSEHLAAADNESDLGLNHLKLSALKINLTPATEPSIPQI
LHSICNGNDGSPAANKHDALQQLVEAVTKDQSIWSKYFNQILTAVLEVLDDSASSIRELA
LSLIVEMLKNQRDAMEDSVEVVIEKLLNVTKDVSPKVSNEAEHCLTTVLSQYDSFRCLSV
VVPLLVTEDEKTLVTCINCLTKLVGRFSQEELMSQLSSFLPALFDAFGNQSADVRKTVVF
CLVDIYIMLGKAFLPYLEGLNSTQLRLVTIYANRISQARTGTPIDANRS
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcactggaattggcgcgagccaaggatacgaaggagagaatggccggtgtt
gagagacttcacgaacttctcgaagcttctagaaagagtctctcttcttctgaggttact
tcgcttgttgatgtctgcatagatcttcttaaagacaacaacttcagggtctgtcagggt
gctttacaatcacttgattccgctgctgttctatccggtgaacattttaagcttcatttc
aatgctcttgtacctgccgttgtagaaagattgggcgatgctaaacagccggttagagat
gctgctaggcgattgctgcttactttgatgcaggtttcttcaccaactatcatcgttgag
agggcagggtcttatgcttggatgcacagaagtttcagagttcgagaagaatttgctcgt
actgttacatcagcaattggtctttttgcatcaacggagctgccccttcaacgaactatt
cttcctccgattttgcaaatgttgagtgatcctaatcctggtgttagagatgcagccgta
tcatgtattgaggagatgtattcacaggctggacctcagttccgtgatgaacttcagcgc
catcatcttcctaccatgatgctaaaagatattaatgccagactagagaagattgagccc
aaaaatcccttagcagatggagtatcgagaaactatgcagctacagaggtgagatccact
ggccttaatcccaagaaaagcagcccaaaggctaaaaactcaacaagagaggtgtctctt
tttggaggggatgctgatattacggagaaacctgtcgagccaattaaagtgtactcggaa
aaggagttggttagggaatttgagaagattgcctctacccttgtgccagagaaggactgg
tctatccgtatttctgctatgcagagaattgaagctcttgttattggaggtgcaactgat
tttccttgtttccgtggacttctaaagcaacttgttgtccctttgagtacacagttatct
gatcgaagatccaccattgtcaaacaggcttgccatctgttgaacttcttatccaaagaa
cttttgggagattttgaggcatgtgctgagatgttcattcctgttcttttcaagcttgtt
gtgataactgttctcgtgattgcagagtctgctgatacatgcataaagacgatgttgcgc
aactgcaaagttgctcgtgcacttcctcgaattgctgattgtgcaaagaacgatcgaaat
gcagttcttcgtgcaagatgctgtgagtatgcacttttaatcctggaacattggcctgat
gcatctgagatacaccgttcagcagaactctatgaggaccttataaagtgttgtgtaggc
gatgcaatgagtgaggtacgatcaactgcaagaactttgtacagaatgtttgcaagaact
tggccagaacgatccaggcgtttgtttatgtcctttgatcctgttatccaaaggatcata
aatgaggaagatggtggaactcacagacggcatgcttcaccttctgttcgagagaggagt
tcacacttttcacttggttctcaaacatccgcttcttcacaaatttctggttatggaaca
tctgcaatagttgctatggatagaagttccagtttaccttcaggcacatccctctcaact
gggttactcctgtcacaaactaaacctgtgggtactggcacagaacgtagcttagaaagt
gtacttcatgccagcaaacagaaagtttctgctatagaaagcttgctcaaaggtctggat
atgtctgagagaagtcgatcctctagtttggatctaggagttgaccctccatcgtcccgt
gatccaccatttcctcttgcagttcctgcgtcaaatagtcttgctaatgctttggtagat
gcaccatctggtttctctaaaggcaagaatcgcaatggcgggttgggtttgtctgatatc
attactcagatccaggcctcaaaggattcaactaaatcatcctatcgaggcagtgcggtt
catgaatctttttcagggcttaattcttattcggcaagaagggcttctgaaaagctacca
gatagaggttttgttgaagataatgcagaactaagggaaggcaggcgattaatgaactca
cacgttcacagacaatacatagagtcgccatacaaagatgctaactttagggattctcac
tataatcatgttccaaattttcaacgtcctttatcaagaaagaacacagcaggaagaatg
tcgtctagcaagagaaggagctttgatgacagtcagctcccgctaggagaaatgtcaagt
tatgtcgagggacctgcctcactaagtgacgcattaagtgagggtctcagttctagttca
gattggaatgctagggttgctgcatttagttatgtcaggtctttgctacagcaggggcct
agaggttttccagaaatcatgcagagctttgagaaggttatgaaattgtttttccagcac
cttgatgatccccatcataaagttgcacaggctgctctgtcaacccttgcagatcttatt
ccagcttgcagaaaaccttttgaaagttacatggagaggattttgccccatgttttttca
cggctaattgatcccaaggaatcagtgaggcagccttgctcaactacattagagattgta
agcaaaacatatggtatcgactcccttttgccagctttgctccgttcattggatgaacaa
cgttctcccaaggccaaacttgctgtaattgagttctcaattggctcttttaacaagcat
ccttcaaattctgaaggtgctggaaatagtggcatcctcaagttatggctcgctaagttg
acaccattggtctatgataaaaataccaaactgaaagaagcggctatttcatgcattata
tcagtgtacacacactttgatggaacaggggttttgaattttattcttagcttatcagtt
gaagaacaaaattctttgagacgagctctgaaacagtatacccctcgtatagaagtggat
ttgatgaattttttgcaaaataaaaaagaaagacaacgttccaagtacgatccatatgac
gttactggcacatcttctgaagagggatatgtaggagcttcaaagaaaaataatttattt
ggaaggtattctgctggttcagttgatagtgatggtgccagaaagtggaattccgttcca
gacccgacctatatggctagttctgtaggtcactcattgtcggatgatactcaagacttc
tatcatggtgttgaaactggtgccaattctgattttactgtttcaaaagcaaaggattca
aaacttttggcccttaccgcaagtgggagtgatgaattatgggctaattcacagaaaagc
aatgatgacagcttaaacatggagcacacttccacaacccgtctggaggttaatgggtta
gttgactcggagcatctagctgcagctgataatgaatctgatttgggactcaatcacctg
aaactttctgctctgaagataaacttaactccagcaactgaaccaagcattcctcagatt
cttcattcaatttgtaatggcaatgatggaagtcctgctgccaacaagcatgatgcactt
caacaactagttgaagctgttaccaaagatcaatccatatggagcaagtacttcaatcag
atattgactgctgtactcgaggtgctagatgattctgcgtcatcaataagagaacttgcc
ctatctctgatagttgaaatgctgaagaatcagagagatgctatggaggattcagtcgag
gttgtaattgagaaattgctcaacgtaaccaaggacgtttctccaaaagtctcaaatgaa
gctgagcattgtttaactacggtgttgtctcagtatgattcatttagatgcttaagtgtt
gttgttcctttgcttgtcacggaagacgagaagactcttgtaacctgtattaactgtttg
acaaagcttgtggggaggttctcccaggaagaattgatgtctcagctatcttcattctta
cctgccctgtttgatgcttttggaaaccagagtgcagatgttcgcaagactgttgtgttc
tgtttagttgacatatacatcatgctgggcaaagcatttttgccatacttggaagggcta
aacagcacacagttgagattggtgactatttatgcaaatagaatatcacaggctagaaca
gggactcccatagatgctaaccgcagttag
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integrated database retrieval system
