Solanum pennellii: 107031121
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Entry
107031121 CDS
T04130
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spen01009
]
107031121
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107031121
Enzymes [BR:
spen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
107031121
Protein phosphatases and associated proteins [BR:
spen01009
]
HAD phosphatases
Fcp/Scp phosphatases
107031121
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
107031121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
Ribosomal_S5
Motif
Other DBs
NCBI-GeneID:
107031121
NCBI-ProteinID:
XP_015087835
LinkDB
All DBs
Position
9:complement(6404331..6415562)
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AA seq
808 aa
AA seq
DB search
MSRLGFKSLVFQGETCLGELDTIPVKDQNFQFPNNEIRIDHISTNSERVHPIAVLRTISS
PVRCKLEPNSNSAPTGSEKSPLITLHSSCYYDLKTAVVFLGEEEIHLVAMASKQKKFPCF
WCYSVPVGLYSACLQMLNMRCLSIVFDLDETLIVANTMKSFDDRIEALRGWLAREMDPIR
SSGMSAELRRYMEDRALLKQYLESDSVVDCGIVYRAQKEEVLPLSEGQEGVVRPVIRLGD
KNVVLTRINPENRDTSVLVRLRPAWEELRTYLTAKGRKRFEVYVCTMAERDYALEIWRLL
DPGSHLINANQLMDRVVCVRSGAKKSLLTVFRNGICHPKLAMVIDDRLKVWDDKDQPRVH
VVPAFAPYYAPLAEMANAVPVLCVARNVACDVRARFFKEFDEGLLRKICEIFYEDEAVNL
PSAPDVSNYLMSEDAGFASCGIPAPIPEGMYGPEVTQRLNQQEGKVNMNSAPVFMSNNPD
MKPGSSQLMVGIAANAPAQSVRPIQPSEKPSLLGAPFRRDNSFSEADGDGKRRHPILNPS
QDMRYRGSAEPPLLPRVPQKPPILPIPPLGGWLVEDDLNKGHMGGRSPGIFQESDASRYA
KQRGHQNFLSQGATNMMLPSYASAGKNGEVNFRHEMHRLIHQTEGRFSQHQSLFNNRESQ
LEAGRMNILPSLATGVLQEIGRLCNSKVEFRPVVSTSEELQFSVEVFFIGERVGVGMGKT
RKDAQQQAAENALRNMAGNYVSYITSHPLAVDKDFDKISVENENGFLWDTVNHVDEPSVD
DRLPQVNVSEVGVNVDASHDRSLNSLKT
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtttagggttcaaatccctggtgtttcaaggagaaacgtgtttgggagagctg
gataccatacctgtgaaggatcagaacttccaattcccaaacaacgagatacggattgat
catatctctacaaatagtgagcgagttcatcctattgctgttttgagaacgatttcatca
cctgttcgttgtaagcttgaaccgaactcgaattcagcgccaactggttccgagaagtct
ccgttgataactcttcattcctcgtgctactatgacctcaagactgcagtggtctttctg
ggggaagaagaaatacatttggtagcaatggcgagtaagcagaaaaagttcccctgtttt
tggtgctattcagtgcccgttggtctgtatagtgcttgtttgcagatgttgaatatgagg
tgtctatcaattgtttttgatctggatgagactttaattgttgcaaatacaatgaagtca
tttgatgatagaattgaggctttgcggggttggttagcacgagagatggatccaattcgg
tcgtctggaatgtccgctgagctgaggaggtatatggaggatcgtgcactgctgaagcag
tatttagagagtgattctgttgttgactgtgggattgtatatagagctcagaaagaggag
gtgctaccattatctgaagggcaggagggtgtagttcggccagtcataaggttgggggat
aagaatgtggtccttacacggattaatccagagaatcgggataccagtgtgcttgttaga
ttacgtcctgcgtgggaggagttgagaacttatttgacggcgaaaggtcggaaaagattt
gaagtatatgtttgcaccatggcagagagagattatgccttggagatttggaggctactc
gacccagggtcacacctcattaatgccaatcaattgatggaccgtgttgtatgtgttaga
tcaggggccaagaagtctttacttactgtcttccgaaatggcatttgtcatccaaaattg
gcaatggttattgatgaccgactcaaagtgtgggatgataaagatcaacctcgtgttcat
gttgtccctgctttcgctccgtattatgctccactagcagagatggccaatgcagtaccg
gtcctgtgtgtggcaagaaatgttgcttgtgatgttagagctcgtttctttaaagagttt
gatgaaggcctactcagaaagatctgtgagattttctatgaagatgaggctgtaaattta
ccttctgcgcctgatgttagcaactacttaatgtccgaggatgctggttttgcgtcatgt
gggattcctgctcctattcctgagggaatgtacgggcctgaagttacacaaaggttgaat
caacaggagggaaaagttaatatgaactctgctcctgttttcatgagtaacaatcctgat
atgaagccaggaagctcccagcttatggttggaattgctgcaaatgcacctgctcaatca
gtgagaccaattcaaccttcagaaaaaccaagtttgctgggagctccatttagacgagat
aacagcttttctgaagctgatggtgatgggaagagaaggcaccccatattgaatcctagc
caggacatgaggtatcgtggttcagcagaacctcctttattacctagagtgcctcagaaa
ccacccatactgcccataccaccacttggtggatggttggtggaagatgacctaaataaa
ggacacatgggtggtcgatcacctggaatttttcaagaatctgatgcatcaaggtacgct
aaacagagaggtcatcagaattttctgagtcaaggtgcaacaaacatgatgttaccatca
tatgcatctgcagggaagaacggggaggtaaatttcaggcatgaaatgcatagacttatt
catcagacagagggtagattctctcaacatcagtcgttatttaacaacagagaatctcaa
ctagaagctgggagaatgaacatcttgccatctttagctactggagtgctgcaagaaatt
ggacggctatgcaactcaaaggttgagttcaggcctgtggtgagcaccagtgaggaattg
caattttcagttgaggtcttctttatcggtgagagagttggtgttgggatgggtaagact
aggaaggatgctcagcaacaggcagctgagaatgcacttcggaacatggctggtaattac
gtctcatacattacatctcaccctctagcagtggataaagactttgataagatttcggtg
gaaaatgaaaatgggttcttgtgggacactgtcaatcacgtggatgaaccttcagtcgac
gatagattacctcaagtaaatgtttcagaggtgggagttaatgttgatgcttctcatgac
cgatcacttaattctttgaaaacatga
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