KEGG   Solanum pennellii: 107031347
Entry
107031347         CDS       T04130                                 
Name
(RefSeq) uncharacterized protein LOC107031347
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
spen  Solanum pennellii
Pathway
spen03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107031347
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spen03041]
    107031347
Spliceosome [BR:spen03041]
 Complex A
  U2 snRNP components
   U2 related factors
    107031347
 Complex B
    107031347
SSDB
Motif
Pfam: RRM_1 RBD_DEAH11 RRM_9
Other DBs
NCBI-GeneID: 107031347
NCBI-ProteinID: XP_015088158
LinkDB
Position
9:complement(81510081..81525397)
AA seq 1113 aa
MGSSRQKDKNGKHNSSKGDSSDGTSARTRPLSFDEIMLRRKSKAEEGDIKNNFIGVDDVS
HKEDRPKKTTNRLEPERHRYESLPSVSRHNSENSRKLGPNPTEANMMADKYARDKHRESR
ESEIKLKTSVNKDVSNKRLAGSNTDKDCPVMRRKDQDLIDDSGNETGRRHSRDLTRKEKS
ADKTDGRHREGRKDKIPDKDERQSYRKRKDMEMSNDSLLNEAEKRHSRNHGRIDSYADRT
KEKSESRRRKHQNDDEERNDALLNEADRRHSRNHGRIDSYADRTKEKSESGRRKHRSDEE
ERNGALLNEAEKRHLRNHGRRDSYADRTKEKSESVRRKSDDEERNREKNADKKHSSVKVS
EITGRVEASRAHLEEERPKRRRSRSRENDRDRGRRSRSGSPRGRKHSDHDFRERGEFSSH
SSKDKSGRSHYDLDKKISSNGSDSHSNRHEGSTSGLGGYSPRKRKSEAAAKTPPPTNRSP
ERKAAWWDLPPASGGISVTGSVPSSVKSSMQPVIPNTHQFSSMIPASSYTTMAAGVSYNY
LTSSVHAIDSVQLTQATRPMRRLYVENLPNSASEKEILDWINNFLMSSGVNRIQGTQPCI
SCMIHKEKCQALLEFLTPEDASAALSFDGRSFSGSILKIRRPKDFVEVATGVPQKSVAAA
DRIDDTVEDSSYKIFVGGISRTISSEMLMEIAKAFGPLKAYHFRMNSDLNEPCAFLEYVD
HSVTLKACAGLNGMKLGGKVLTVVRAVPDTALLDKDENTPLYRIPQHAKPLLEKHTEVLK
LKNVVDANVLSFLSEAELEELLEDIRLECARFGAVKSINVVKQSQCSLTSDPAAMDTSST
LNDSNMDFGEECDRNDPITRSDDHELEVGGPHFPNSDHHELEVGGSHIPNSDDHELEVGR
PYFPNSDEPMETNSDEEAERCADSKTHISESSQGDSQKAGDDDVLAGGSHSDDRPSEELI
KDDSSDPLPDDSSVSAQETIFQENLEVTRTGMVSERKDENANPSPLEHLEINNDSPVKEA
IKSEEDNGNVDDRPSEPEFSSKEELDAPEELEKKEEIPITEVFDPGCVLVEFRRAEAACM
AAHCLHGRLFDDRTVTVEYVPLDLYQTKFAKQN
NT seq 3342 nt   +upstreamnt  +downstreamnt
atgggatccagtcgacaaaaagataagaatggtaaacataattcatcaaagggtgacagc
agcgatggtacatcagctaggacaagacctctcagctttgatgaaattatgcttagaagg
aaaagtaaagcagaggaaggggacattaagaacaattttataggagttgacgatgtatca
cataaagaagacaggcctaagaaaaccactaatcgtttggaacctgagcgacatcgctat
gaatcattacctagtgtttccaggcataattcagagaattctaggaagttagggccaaat
ccaacggaggctaatatgatggctgataaatatgctagggataaacacagggaaagtaga
gaatctgaaatcaaattgaagacgtcagtgaataaagatgtaagcaataagagactagcg
ggtagcaacactgataaagattgtcctgtcatgagaagaaaagatcaggatcttattgat
gattctggaaatgaaactggtagaagacattcaagagatttgacccggaaggagaaatca
gcagacaagactgatggtagacacagagagggaagaaaagacaaaattcctgataaggat
gagagacagtcatacaggaagaggaaagatatggaaatgtcaaatgattctcttctgaat
gaggctgagaaaaggcattcaagaaatcatggacggatagatagttatgctgacagaacc
aaagaaaagtctgaatcaagaagaaggaagcaccaaaatgatgatgaggagagaaatgat
gctcttctgaatgaggctgatagaaggcattcaagaaatcatggacggattgatagttat
gctgacagaactaaagaaaagtctgaatcaggtagaaggaagcaccgaagtgatgaagag
gagagaaacggtgctcttctgaatgaggctgagaaaaggcatttaagaaatcacgggcgg
agagatagttatgctgacagaactaaagaaaagtctgaatcagttagaaggaaaagtgat
gatgaggagagaaatagagagaagaacgccgataaaaaacacagttcagtgaaagtttct
gaaattactggaagagtggaagcttctcgggctcatctagaggaagaaagaccaaagaga
agaaggtcaagaagtcgagagaatgatagagatcggggtagaaggtctcgttctggttca
ccgagaggacgtaagcattcagatcatgatttcagagagcgtggtgagttttcctctcat
tcttccaaagataaatctggaagatcacattatgatctggataaaaagatatccagcaat
ggttcagatagccattccaaccgccatgaaggatctacaagtggtcttggtggttattca
ccaagaaagaggaaatcagaggctgctgctaaaactcctcccccaactaaccgctctcca
gaacgaaaagctgcttggtgggatctaccacctgcatcaggtggtatcagtgttactggt
tctgttccttctagtgttaagtcttcaatgcagcctgtaataccaaatacacaccagttc
tctagcatgattcctgctagttcatacacaacaatggccgccggtgtttcatataattac
ttaacgtcatctgtacatgcaattgattccgtccagctgacacaagccacacgacctatg
agaaggctttatgtagagaacttgccaaactctgcctctgagaaagagattctggactgg
attaataatttcttgatgtcttcaggagttaatcgcattcaaggaacccaaccatgtatc
agctgtatgatacacaaggagaagtgtcaagctcttttagaatttttaacacccgaagat
gcttctgctgcactatcttttgatggaagatctttctctggttctattcttaaaatcaga
cgcccaaaagacttcgtggaagtggctactggtgttcctcagaagtcagtcgctgctgct
gataggatagatgacactgtagaggattcttcttataagatttttgttggtggaatttca
agaactatttcatcagagatgcttatggagattgctaaagcctttggacctttgaaagct
taccatttcaggatgaattcagatctcaatgaaccttgtgcatttcttgagtatgttgac
cattcagttactcttaaagcttgcgctggtcttaatggtatgaagttgggtgggaaagtg
ttgactgttgttcgggctgtcccagatactgctttactggacaaagatgaaaatacacct
ttataccggattccgcagcatgcaaagccactgttggagaagcacactgaagttctaaag
ctgaaaaatgtggtggatgcaaatgtactcagttttttgtctgaagcagaacttgaagaa
ttactggaagacatcagattggagtgtgccaggtttggcgctgttaaatcaattaatgtt
gtaaagcaaagtcaatgttctctcacatctgatcctgctgctatggatactagttctacg
ttgaacgatagcaatatggattttggggaagagtgtgacagaaatgatccgatcactagg
agtgatgatcacgagttggaagttggtgggccacacttccccaacagtgatcatcatgag
ttggaagttggtgggtcacacatccccaacagtgatgatcatgagttagaagttggtagg
ccatacttccccaacagtgatgaacccatggaaaccaatagtgatgaggaagctgaaaga
tgtgctgatagtaaaacacatatatcagaatcttcacaaggtgattctcaaaaggctggg
gatgacgatgttttggctggtggcagtcattccgatgatagaccttctgaggagctaata
aaagacgacagctctgaccctctaccagatgacagtagtgtctctgctcaagagacaatc
ttccaagaaaatctcgaggttacccgtactggtatggtttcagaaaggaaagatgaaaat
gctaatcccagtccactggagcatcttgagataaacaatgactcaccagttaaggaagca
attaagtcagaggaagacaatggaaatgtagacgatagaccttctgaaccggaattctca
tcgaaagaagagttggatgctccagaggaacttgagaaaaaggaagaaattcctattact
gaagtgttcgatccgggctgtgtacttgtggagtttagaagagcagaagctgcatgcatg
gctgctcattgtctacatggacgactgtttgatgaccggacagtgactgtggagtatgtt
ccccttgatctctatcagacaaagtttgctaaacaaaactaa

DBGET integrated database retrieval system