Solanum pennellii: 107031370
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Entry
107031370 CDS
T04130
Name
(RefSeq) uncharacterized protein LOC107031370 isoform X1
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spen03009
]
107031370
Enzymes [BR:
spen01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
107031370
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
107031370
Ribosome biogenesis [BR:
spen03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
107031370
23S rRNA modification factors
107031370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
S4_2
Methyltransf_11
Motif
Other DBs
NCBI-GeneID:
107031370
NCBI-ProteinID:
XP_015088191
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All DBs
Position
9:complement(36462310..36504814)
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AA seq
309 aa
AA seq
DB search
MALKLPISRCYSFSSSFFFSCKLPYTTPNLSATFKISNYLSVRAFASVTEEKGQPKKKKR
RLDELCLERFQQYSRTFIQSWILQGKVLVDGRVVTKAGTQIPDKAVVEIMAEIPKYVCRG
GHKLEAAIENLGIDVAGKVALDSGLSTGGFTDCLLQYGASFVYGVDVGYGQVADKIRRDE
RVSVIERTNLRYLSELPQKVDLVTLDLSFISILLVMPAVVNLMKEEATLVTLIKPQFEAR
RSQVGGGGIVRDPLVHQEVIERIINGVQNHGFQCKGWIESPLKGAEGNKEFLACFNRTVI
SEEVEKQQV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgaagctaccaatatctcggtgttacagtttcagcagtagcttcttcttctcc
tgcaaattaccatacactactccaaacctctctgccacattcaaaatcagcaattatctc
tctgtaagagcctttgcttccgtcactgaagagaagggtcaaccaaagaaaaagaaaagg
agactggatgaattgtgtttggagaggtttcagcaatacagccggacatttatacagtca
tggatcctccaaggcaaagtgttagtagacggaagagttgttaccaaagcagggactcaa
atccctgataaagctgttgtggagatcatggctgaaattccaaaatatgtatgcagagga
ggacataaactggaggccgcaattgaaaacctggggattgatgtcgcaggaaaagtagct
cttgattcaggcttgtctactggaggatttactgattgtttacttcagtatggtgcttca
tttgtctatggagttgatgtaggatatggacaggtggcagataaaattcgtcgagatgag
cgtgtaagcgttatcgagcgtacaaacttgagatacctttctgaactcccacagaaggtt
gacttagtaactttggacctctcctttatttcgatacttctggtgatgcctgcagttgtc
aatttgatgaaggaggaagctactttagtgactctgattaaacctcagtttgaggctcgg
agatcccaagttggaggaggtggaattgtaagggatcccttggtccatcaagaggtgatt
gagaggatcattaatggggtacaaaaccatggatttcaatgcaaaggttggattgaatct
cctttgaagggagctgaaggaaataaagagtttctagcttgcttcaatcgaacagtcatc
agtgaggaagttgagaaacagcaagtctag
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