Solanum pennellii: 107031405
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Entry
107031405 CDS
T04130
Name
(RefSeq) probable DNA helicase MCM8 isoform X1
KO
K10737
DNA helicase MCM8 [EC:
5.6.2.4
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spen03032
]
107031405
03400 DNA repair and recombination proteins [BR:
spen03400
]
107031405
Enzymes [BR:
spen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107031405
DNA replication proteins [BR:
spen03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
107031405
DNA repair and recombination proteins [BR:
spen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
107031405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
WHD_MCM8
MCM_OB
MCM_lid
Mg_chelatase
AAA_5
AAA_3
Sigma54_activat
AAA_16
FtsK_SpoIIIE
AAA
Motif
Other DBs
NCBI-GeneID:
107031405
NCBI-ProteinID:
XP_015088243
LinkDB
All DBs
Position
9:complement(961300..970950)
Genome browser
AA seq
819 aa
AA seq
DB search
MTGEMAVNGKIQQKLTTPIGLGIALSIYFSGIDFHVGDPQFRLASELVRFFSAPSGEQFV
SQVKEVDGMFLLPLDFQQFRKLCELQEFYTILESKSKDALLCMSAALHKVYFMKLGDDSF
DDFVKINIRLHNYPQSMIALKNLKAAYIDRLVSVRGTVVKVSTVKPLVMQMCFACTKCGT
SITRDFPDGKFSPPPVCELHGCKCRTFNPIRSTARIIDFQKIRIQELLKSEHHEEGRVPR
TVECELTEDLVDACIPGDIVTVTGIIRVINNYMDIGGGKSKGKNQGLYYLYLEVVSITNS
KSQSTPEGSQDNPNARATDLLDLYSFSPKDLEFIVKFSEEHGSDVFRQILQSVCPSIYGH
ELVKAGITLALFGGVRKHSMDQNKVPVRGDIHIIIVGDPGLGKSQLLQAAASISPRGIYI
CGNATTNAGLTVAVVKDPLTGDYAFEAGAMVLADSGLCCIDEFDKMSAEHQALLEAMEQQ
CVSVAKAGLVASLSARTSVLAAANPVGGHYNRAKTVNENLKMNGALLSRFDLVFILLDKP
DEVLDKRLSEHIMSLHAKSVEQPPVAKRLCTALLDVGEIDMNTKKGSLVARLRLDPKKDS
GFVPLPAPLLRKYIAYARTYIFPRLSNVLPFMFESFSYSLKLLLIFLSFGARMTKPAAEI
LQKFYLKLRDHNTSGDGTPITARQLESLVRLAGARARVDLREEITEQDALDVVEIMKESL
YDKYVDEHGFVDFGRSGGMSQQKEAKRFLSALHKQSELQQKDCFSISEIYSLADRIALMV
PDIDTFVDNLNSVGYLLKKGPKTYQVLSSSYSQTSRSRG
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaccggagaaatggcggtgaacgggaagattcaacagaaattgacgacgccgatcggt
ctcggtatagcactgtcgatttatttctccggtatcgatttccatgtcggtgaccctcaa
ttccgattagcctctgagcttgttcgcttcttctctgctccttccggtgaacaattcgtt
tctcaggtgaaggaggttgatggcatgttcttattgccactggactttcagcaattccga
aaactttgtgagctccaagaattttatacaattttagagagtaaatctaaagatgctctg
ttgtgtatgagtgctgcattacacaaggtttactttatgaaattgggggatgacagtttt
gatgattttgtgaagataaatatacgtctccacaactatcctcaatcaatgattgcattg
aagaacctaaaagctgcttatatagataggcttgtctctgtacgtggtacagtggtaaaa
gttagcacagttaagcctctggtgatgcaaatgtgttttgcatgtactaagtgtggaacc
agtattactcgtgactttccagatggaaaattttcacctccaccagtatgtgaattgcat
ggttgtaaatgtaggacttttaatcccataaggtctacagctcgaattatagactttcag
aaaataagaattcaggagctgctgaaatctgaacatcatgaagagggacgggtacctcga
actgttgaatgtgaactaactgaagatcttgtggatgcatgcatccctggggatattgtg
actgtcactggtattattagggtgattaacaattacatggatattggaggaggaaagtcg
aaaggcaagaatcaaggactttattatttgtacctagaagtagtatctattacaaactcg
aagtctcagtcaacacctgagggttcacaagataaccctaatgctcgagctacagaccta
cttgatttatactcattctctccaaaggatttggagtttattgttaagttttctgaagaa
cacggttctgatgtctttcgacaaatacttcaatctgtttgcccctcgatctacggtcac
gagcttgttaaagcgggaattacattagctttatttggtggtgtacggaagcattccatg
gatcagaataaggttcctgtgagaggagatatccacataataattgtcggtgatcctgga
ttgggtaaaagtcaactacttcaagcggcagcttccatttctccccgtggcatatatatt
tgtggtaatgcaacaactaatgctggccttactgttgctgttgtcaaggatcctttgacc
ggtgactatgcgtttgaagcaggtgctatggttcttgcagatagtggattatgttgcatt
gacgagtttgacaaaatgtctgctgaacatcaggccttattggaggctatggaacaacag
tgcgtctctgttgcaaaggcaggacttgttgcaagtttgtcagcgcgaacatctgtttta
gcagcagcaaaccctgttggtggccactacaaccgtgcaaaaactgtgaacgagaacttg
aagatgaatggtgctttgctttcacgatttgatttggtgttcatattacttgataaacct
gatgaggtgctggacaagcgactctctgaacatattatgtcacttcatgcaaagagtgta
gagcagccaccagtcgcaaaacggttatgtacagccttgctggatgttggagaaattgac
atgaatacaaaaaagggttctttagttgcaaggctgagacttgaccctaagaaagacagt
ggttttgttccattgcctgcccctcttctgcgtaaatacattgcttatgcaagaacttat
atatttcctaggttgtcaaatgtgcttccttttatgtttgaaagttttagctactctttg
aaacttttacttatcttcttgtcatttggtgcaaggatgacaaaaccagcagcagaaatc
ttgcagaagttttacttgaagttgagggatcataatacgtccggtgatggtacaccaata
acagcaaggcaattagagagcttggtaaggttagcaggagctcgagctcgagtagatcta
agagaagagataactgagcaagatgctctggatgttgtggaaataatgaaagaatcatta
tacgataagtatgttgacgaacatggatttgtggattttggacgaagtgggggaatgagt
cagcagaaagaagcaaaacggtttttgagtgccttgcataagcaatcagaattgcagcaa
aaggattgcttttcaatttctgaaatatatagtctggctgatcggattgcattaatggtt
ccagatatcgatacattcgtggataatcttaatagtgttggttatttactaaagaagggt
cccaaaacatatcaggttctatcttcatcttattcacaaacatcaaggtcaagaggatag
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