Solanum pennellii: 107031521
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Entry
107031521 CDS
T04130
Name
(RefSeq) LIMR family protein At5g01460
KO
K14617
LMBR1 domain-containing protein 1
Organism
spen
Solanum pennellii
Pathway
spen04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
107031521
04980 Cobalamin transport and metabolism
107031521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107031521
Membrane trafficking [BR:
spen04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
107031521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
Na_Ca_ex
Uso1_p115_C
Motif
Other DBs
NCBI-GeneID:
107031521
NCBI-ProteinID:
XP_015088416
LinkDB
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Position
9:complement(227834..234403)
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AA seq
509 aa
AA seq
DB search
MGDFNLALVIVAIVVCILVFIVNVYLLINYQHPDDANQAYFPKFVVVFGLSVAAISILML
PADVANRQACQHAIYNGACNLTLPMKQLWLAIYIVDAILVFFVIPFAMFYYEGDQDKTIA
KRLKSAMCWVLVTAIVCALLLGILYGLAGKADFTVRHLSSATTSFPNSFDFNNGQQCIGN
GARQCSAYSASASSETTWTMRATFPEYVVALATIVGSVLFTIFGGVGIACLPLGLIFSFI
RRPKAVITRSQYIKEATELGKRAKELKKATDALHQEERSGSKGRKWRKNVKAVEKEVLLL
EDDVKALEEMYPQGEKAETAWAMTVLGYLAKLILGVLGLIVSVAWVAHIVIYLLIDPPLS
SFLNEVFIKLDDIWGLLGTAAFAFFCFYLLLAVIAGAMMIGLRLVFVTIHPMKWGATLMN
SFLFNVGLILLCSISVIQFCATAFAYYAQATAAQEIFGHNLQSLRGIKYLYKYNVFQIGF
IVLAGLTFVYYAAFGWRRKKPSGRFQLSS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggggatttcaatctcgccttggttattgtagccattgtagtatgtattctcgttttc
atagtcaatgtctatcttctcatcaattatcagcatcctgatgatgctaatcaagcctat
ttccccaaatttgttgtcgtttttggcttatcagtcgctgccatttctattctcatgtta
ccggccgatgttgctaatcggcaggcatgtcaacacgcgatttataatggagcgtgtaat
ctcacgctcccgatgaagcaactatggcttgctatctacattgttgatgctattctcgtt
ttcttcgtcattccttttgctatgttttattacgaaggcgaccaggataagactattgcc
aaaaggcttaaaagtgcaatgtgttgggtgttggtcacagcaatcgtgtgtgctttgttg
cttggaattttatatgggctcgccggaaaggcagacttcactgtaagacacctgtcatca
gccaccacttcatttccaaattcatttgattttaacaatggtcaacaatgtattggaaac
ggtgcccgtcagtgttctgcatactctgctagtgcttcctctgagacaacctggactatg
cgtgctacttttcctgaatatgttgttgctctggctactattgttggatctgtacttttc
acgatttttggtggtgttggcattgcttgtctcccgttgggacttatattttcgttcatc
aggcgtccaaaggctgttattacacggtcacagtatatcaaggaagctaccgagctaggt
aaaagagcgaaagaattgaagaaagcaactgatgcacttcatcaagaagaaaggagcggg
agtaagggaagaaaatggcggaagaatgtaaaggcagtcgaaaaggaggtgcttcttctt
gaagacgatgtcaaggcgctagaggaaatgtatcctcaaggtgaaaaggctgagactgct
tgggcaatgacagttctaggttatttggcaaaactcatcctaggtgttttagggctgatt
gtctctgtagcttgggttgcccatatcgtgatatatcttctgattgatcctccactttct
tctttccttaatgaggttttcatcaaactagatgatatttggggtctcttgggcactgca
gcttttgcatttttttgcttctaccttctgcttgcggtgattgccggagctatgatgatt
ggcttgagattagtttttgttacgattcacccaatgaagtggggagctacgctcatgaac
tcctttcttttcaatgtgggccttattcttctttgctccatcagtgtcattcagttctgc
gccacggcctttgcatactatgctcaagccactgcagctcaagaaatatttggtcacaat
ctgcaatctcttcgtggaattaagtatctatacaagtacaacgtgtttcaaattggattc
attgttttagctggtctgacatttgtttactatgctgcctttgggtggagaaggaaaaag
cctagtgggaggttccagctctccagttaa
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