Solanum pennellii: 107031617
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Entry
107031617 CDS
T04130
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
spen
Solanum pennellii
Pathway
spen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107031617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spen03041
]
107031617
Spliceosome [BR:
spen03041
]
Common components
Common spliceosomal components
SR proteins
107031617
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
zf-CCHC_3
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
107031617
NCBI-ProteinID:
XP_015088532
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All DBs
Position
9:664278..669167
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AA seq
315 aa
AA seq
DB search
MPRYDDRVGNSTRLYVGHLSSRTRSRDLERAFSKYGRVRDVDMKHDYAFVEFSDPRDADD
ARYYLDGRDIDGRRIIVEFAKGVPRGPGGSREYLGKGPAPGSGRCFNCGLEGHWARDCKA
GDWKNKCYRCGERGHIERKCPNSPKKLSRRSYSRSPVRSKSRSRSRSRSPRRSYSRSRSY
SQSRSPPPKREQVDQVKRSRSYSRSPEPRKDSPSPPPKTRKRSPTPEEGSPMEAKSPSSP
MREEGAYSQSPRERSVSPSSPRRDSPAPRKYDDDSPAEANGGSRSPSPKYQRNHEDDEDE
GEFRNQHSDRESQSP
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgttatgatgatcgtgtgggaaatagcactcgtctctatgtgggacacctgtct
tcacggacccgttcacgtgatctggagcgtgcgttcagtaaatatgggagagtacgggat
gtggacatgaagcacgactatgccttcgtggaatttagtgatcctcgagatgctgatgat
gcaagatactatttagacggccgtgacattgatggacgccgcataattgtggaatttgcc
aagggtgtgccacgtggaccaggtggttcgcgtgagtatcttggcaaaggacccgctcct
gggtcaggtcgctgcttcaactgtggccttgaaggtcactgggctcgagattgcaaagct
ggggattggaagaacaagtgttatcgatgtggagaaagaggtcatatagaaagaaaatgc
ccaaatagtcctaaaaaactcagtagacgcagctactcacggtcgcctgttaggtcaaag
tcacgctcacgttctcgttcacgttctcctcgtcgaagttatagcagaagtcgcagctat
agtcaatcaagatccccgccaccaaagagagaacaagtcgaccaggtcaagcgatcaaga
agctacagtaggagccccgagccacggaaggatagtccaagccctccacccaagactagg
aagcgcagcccaacacctgaagagggaagcccgatggaagcaaagagcccttcttcacca
atgagagaagaaggtgcctatagccaaagccccagagagaggagcgtcagtccttcaagt
cctagaagggatagcccagctcctcgaaagtatgatgatgacagccctgctgaagctaat
ggtggaagtcgaagtccgagtcccaagtaccagaggaaccatgaagatgatgaggatgaa
ggtgagtttcgtaatcaacactctgatagagagagccagtcaccttga
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