Solanum pennellii: 107031635
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Entry
107031635 CDS
T04130
Name
(RefSeq) uncharacterized protein LOC107031635 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spen04131
]
107031635
Membrane trafficking [BR:
spen04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
107031635
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
107031635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
ANAPC4_WD40
WDR55
Synaptobrevin
Lgl_C
Beta-prop_HPS5
TFIIIC_delta
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
PEP5_VPS11_N
NBCH_WD40
ABC_tran_Xtn
Motif
Other DBs
NCBI-GeneID:
107031635
NCBI-ProteinID:
XP_015088557
LinkDB
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Position
9:complement(403897..418571)
Genome browser
AA seq
1105 aa
AA seq
DB search
MFAKKLFQKATQYHHHQTNGSGLTASDLNVRATVHYGIPSTASILAVDSVQRLLAIGTLD
GRIKVIGGDNIEGLLISPKQLPYKYLEFLQNQGFLVSITNENDIQVWNLKSRSVACDLQW
ESNITAFSVINGSSFMYVGDEYGTISVLKFHVENRELLQLPYQIIWSSLSEATSFPYSDH
QPVVGILPQPFTSGNRLLIAYECGLIILWDVVEAHVIIVKGDKDLHLKDGAFKKSADSSS
PDDLLQHQFEEKEITTLCWASIDGSILAAGYIDGDILLWKMSKSSASKGQEAGPFDNVVK
LQLSSVEKRLPIIVLHWWANSKSQNNSDGHLLIYGGDEIGSDEVITILTLEWSSGIETLK
CVGRVDLTLSGSFADTILLPTTGATTPDGKAALFVLMSPGQLNLFDCSTLADLVSKEEKK
VSLSAKDFPVELPTVDPSMTATKLTQLHSDGNLTELLQEKFSTATSSGASRWPLTGGVYN
HTSRAETNRIQRVFIAGYQDGSVRMWDATHPVLLLLCVLDREVKGVNTVISSASVSKIDF
CFQTLRLAVGDASGLVRLYDFKHSDMGNFHVVTDAKSEVHELAQGQGPTCRAVLKLLDVR
VRAIEFVNHGAKLVVGYENAKVAVLDMTSLSVLFLSDSASAGCSPLVTLITKRFVQSDSN
SKSPKQSELTEKRMEELMFILTEDAKIYVIDGGNGKTYGSGPLHLKKVSTAISMYVIENN
IPFSYVISKQPESSKDDAASNEPSQEMTTRDLSDTVPFLENDSSRKYFEESFILLCCKDS
ICSYATNSVVHGDNKSVCKVKLDKPCCWTTTLVKDGKACALLLLFQTGDIEIRSLPDLEL
LERTSLMSVLRWNFKPNMDRAMSSMENGHIILANGSELALVSLLASENDFRIPESLPSLH
DEVLAAAADAAMKFSTQKKKQMLLQGGGPNILGTLVKGFKAGKTNHNMDFSQMTQSNFSH
LEGVFMKNPLHSELSPTKEALEELELDIDDIEIDDPVPVASTSSHNTQNSKRGTEREKLL
DSEGDDAKPRPRTREEIIAKYRKTGVQDASSAAGQARDKLLERQEKLERINRRTEELRSG
AEDFASLANELVKVMENRNRKWWQI
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcgaagaagctttttcagaaagctactcaatatcatcatcaccagacaaatgga
agtggtttaacagcaagtgacctgaatgttcgtgctactgtacattatggtatcccgtca
accgcatcaattcttgcagtagactccgtccagcgcctattggctattggaacattggat
ggtaggataaaagtgattggtggggacaatattgaaggtctcttgatttctccaaagcag
ttgccatacaaatatctagagttccttcaaaatcagggttttcttgtcagcatcacaaat
gaaaatgatattcaggtttggaatctcaaaagcagatctgtagcttgtgatttgcaatgg
gaatcaaatataactgccttttcagttatcaatggctcttccttcatgtatgttggagat
gaatatggaacaatctcagttttgaagttccatgttgagaacagagagctgctgcaactg
ccatatcagatcatatggagttctctttctgaagcaactagttttccatattcagatcat
caaccagttgttggaattctcccgcaaccttttacatcgggaaatagattattgattgca
tacgagtgtggtttaattatactatgggatgtcgtcgaagcccatgttatcattgtcaaa
ggtgataaagatctccatttgaaggatggtgcttttaaaaagagcgcagattccagctct
cctgatgatctattgcagcaccaattcgaggagaaagaaataaccacactttgctgggca
tccattgatggatccattcttgctgctgggtacatagatggagatattctgctttggaaa
atgtcaaaatcgtctgcaagcaaaggtcaggaagccggaccatttgataatgttgttaag
ctacagctgtcttctgttgaaaagaggcttccaattattgtcttacactggtgggcaaac
agtaaatcccagaataatagcgatggccatctcctcatttatggcggtgatgaaatagga
tccgatgaagtcattacgatccttacacttgagtggtcgtctggaatagagactttgaaa
tgtgttggtcgtgttgacctcactcttagtggctcatttgcagatacgatcttattacca
actacaggggcaacaacacctgatggaaaagctgctttatttgttttgatgagccctgga
caactaaacctttttgattgttcaaccttggccgacttggtatccaaagaggagaaaaaa
gtatctctatcagctaaggattttcctgtagaattgccaactgttgatccttccatgaca
gcgacaaagcttacccagttgcattcagatggaaacttaacggagcttctgcaagagaag
ttctccacagcaacatcatctggggctagcagatggcccttgactggaggggtgtataat
catacttctcgagctgagactaacaggattcagagagtttttatagcaggttatcaggat
ggatctgtaaggatgtgggatgccactcatccggtcctcctcctcctttgtgtcttggat
agagaggttaaaggtgttaatacagttatatcaagtgcttcagtttcaaaaatagatttc
tgcttccagacattaagattggcagttggggatgcaagtggtctggtgcgtctttatgat
ttcaaacatagtgatatgggaaacttccacgttgttactgatgctaaaagtgaagttcat
gagttggcacaaggtcaaggacctacttgcagagctgttctaaagcttctcgatgttcga
gtccgagcaattgagtttgtaaatcatggagccaaacttgtagttggatacgaaaatgct
aaggttgcagtgcttgatatgacttcattatcagtattgttcttgtcagactccgcatct
gctggttgttctccactggtcactctgattacaaagagatttgtgcaaagtgacagtaat
agcaaaagcccaaaacaatcagagcttacagaaaagcgtatggaggaactcatgttcatt
ttaactgaggatgcaaagatatatgtaattgatggtggtaatggtaaaacgtatggttca
gggcccttgcatttaaagaaagtgtcgactgcaatttctatgtatgtcatagaaaacaac
atcccattttcttatgtaattagcaagcagccagagtccagcaaggatgatgcagctagt
aatgagccttcacaggaaatgaccactcgtgacctaagtgatacggttcccttcctagaa
aatgactcctccaggaaatactttgaggagtcctttatcctactttgctgtaaagattca
atatgctcttatgctacaaattctgtagttcatggtgataacaaatctgtttgcaaagtg
aagctcgacaagccttgttgttggactactactcttgtgaaagatgggaaagcttgtgcg
ctactattactctttcagactggagatatcgagattcgatctttgcctgatctagagttg
ctggagcgaacttctttaatgtcggttttaaggtggaatttcaaaccaaatatggacagg
gcaatgagttccatggagaatggccatattattctggcaaatggttctgaactggcttta
gtgtccctattagccagtgaaaatgatttcagaattccagaatctttgccgtctcttcat
gatgaagtgctcgcagctgcagcagatgctgccatgaaattctccactcagaagaagaaa
cagatgttgctgcagggtggggggccaaatattttaggtactctagttaaaggatttaaa
gcaggaaaaacaaatcataatatggatttcagtcagatgacgcagtcaaactttagtcat
ctggaaggtgtttttatgaagaacccactccactcagaactgtccccaactaaggaagct
ctagaagaactggagctcgatatagatgatattgaaattgatgaccctgtccctgtggct
tctacttcatctcataacacacaaaatagcaaaagaggaactgaaagagaaaagttgctt
gattctgagggtgatgatgccaaacccagacctaggacacgtgaagaaatcattgcaaaa
tatagaaaaactggggtccaggatgcatcatcagcggctggacaagcaagagacaagctt
ctagaacgccaagaaaaactcgagagaatcaaccgacgaactgaagaactacgcagtggg
gctgaagactttgcatcattggcaaatgagcttgttaaggtaatggaaaatcgcaatcgg
aaatggtggcagatatga
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