Solanum pennellii: 107031838
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Entry
107031838 CDS
T04130
Name
(RefSeq) condensin complex subunit 1 isoform X1
KO
K06677
condensin complex subunit 1
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spen03036
]
107031838
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
107031838
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
Cnd1_N
Adaptin_N
INTS1_R4
Cnd3
Cohesin_HEAT
Cupin_6
Motif
Other DBs
NCBI-GeneID:
107031838
NCBI-ProteinID:
XP_015088810
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All DBs
Position
10:complement(78044341..78054461)
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AA seq
1343 aa
AA seq
DB search
MAPPFIFPPNLYSLEEEDSDSNCLSVQNPTSLSNLRPSELEEFVKGVSFDLSDKELFCVE
EHDVFDRVYSLVKEFSCLTPGCKLNLVESLRSNLSVLLPTVDSLLRVSQQKDGNADEEKN
DSEEDECSLADRVASYRNAFKIYTFFLIHIVLIEESKSSSNNSTKVVASSRKKQLVSAWN
WEPQRARILNSVANSLEINLSMLFGSSDPDENYLSFIVKNAFSLFENAAVLKDSDTKDAL
TRIIGTCATKYHYAAQSCASILHLVHKLDFAVSHLADAVAWAEKKYADGSMASSLIREIG
RTAPKDYVKDTVGAENVGRFLVELADRMPKLISTNIGLLIPHFGGESYKMRNALVGVLGK
LVMKAFDDSEGEVSSKSIRLRTKQAMLEILLERCRDVSAYTRSRVLQVWAELCEEHSVSI
GMWNEVAEVAAGRLEDKSAIVRKSALNLLIMMLQHNPFGPQLRAASFEATLEQYKKKLDD
LGPKAQPTSVLDGLSSCDEISNEDGEVLNVGEEMNKEQSDSLTDSCLPHEEDMIGQTDDS
VPDFGNLEQTRTLVASLEAGLRFSNCVSATMPTLVQLMASSSATDVENTILLLMRCRQFQ
IDGSEACLRKMLPLVFSQDKTIYEAVENAFITIYVRKSPEETAKNLLNLAIDTNIGDLAS
LEFLIGALMSKGDLTSSTLSALWDFFCFNIAGTTAEQSRGALSILCMAAKTSNSVLSSHL
QDIIDIGFGRWAKVEPLLARTACLALQRLSEEDRKKLLTTNGNRVFSILESLVTGFWLPE
HIWYAAADRAIASIYTIHPYPDKMAADLVKKALRSVFDCSGGDELQNGSSNMLTTVQVTK
LSRLLFVVSHVALNQLVYIESWVRKIQKDKAKREKMIMEDKGDSTDNTGPPKDNGINAEL
GLAASEDAFLDTLSERAEKEIVSGRSCERNLIGHCAPFLSKLCRNYSLMQKYPELQASGM
LALCRFMIIDVDFCDANLQLLFTVVENAPSETVRSNCTVALGDLAVRFPNLLEPWTENMY
ARLRDPSVSVRKNAVLVLSHLILNDMMKVKGYINEMAICLEDEDERISNLAKLFFHELSK
KGNNPVYNLLPDILGKLSVQNLKEESFCNIMQFLIASIKKDKQMEALVEKLCNRVSGVTD
VRLCEYISYCLSQLSYTDKSMRKLIELFKTYEHALSEDSVMDNFRTIINKGKKFAKPELK
SCIEEFEEKLNKFHIERKEQELTAKNAQSHQQKVESLESIKVTVKEEEEINESEISEDSE
VTNPLMEAQTECSPSEPACAESEANSHASSEVTDSAIDENEVQSPTSRTRGATKSRAKSS
SRSYQSLDTSNSTRRITRSRRRS
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atggctccacctttcatatttcccccaaatttatactctctggaagaagaagactccgat
agcaactgtctttcagttcaaaatcccacttcactgagcaatctccgtccttctgaattg
gaagaatttgtcaaaggcgtctcttttgacctatcggacaaagagctattctgtgtggag
gagcatgatgtgtttgaccgtgtatattcactggtgaaggagttttcttgccttactcca
gggtgtaagctcaatttggtggagtctcttaggtccaacctcagtgttttgctccccact
gtggattccctcttgagggtatctcagcagaaggatggaaatgctgatgaagagaagaat
gacagtgaggaggatgagtgttcgcttgctgatagagttgcatcatatcgaaatgctttc
aaaatatacactttcttcctcattcacattgtgctcattgaggagtctaaatctagttct
aacaacagtacaaaagtggttgctagtagtcgaaagaagcaacttgttagtgcatggaat
tgggagccacaacgggcgaggatactgaattcagttgcaaattcattagagatcaacctc
tcgatgctgtttggatcatcggatcctgatgaaaattacttgtccttcattgtgaagaat
gctttttcgctgtttgagaatgcggcagtcttaaaagattcagacacaaaagacgccttg
actcgcataatcgggacatgtgctaccaaataccactatgctgcacaatcatgtgcttca
attttgcacctggttcacaaattagattttgcagtttcccatttggctgatgcagttgct
tgggctgaaaagaagtatgctgatggtagcatggcttcttctcttatcagagagatagga
aggactgccccgaaagattatgtgaaggatacagtaggggctgaaaatgttgggcgcttt
cttgtagagctcgctgatagaatgcctaagttgatctcaactaatattggcttattaatc
ccacattttggaggtgaatcttataagatgagaaatgctcttgttggggtgttgggtaaa
ttggtcatgaaggctttcgacgacagtgaaggtgaagtgagttctaaatcgattcgtctc
cgaaccaagcaggccatgttggaaatcttattggaacgttgtagggatgtgtcagcctat
acaaggagtcgagtgcttcaggtctgggctgaattatgtgaagaacattcagtttcaatt
ggcatgtggaatgaggttgcagaagtagcggctgggaggttagaggataagagtgcaatt
gtcagaaaatctgcactgaatttacttattatgatgttgcagcacaatccctttggaccc
cagcttcgagcagcatcttttgaagcaaccttagaacaatacaagaaaaagttagatgac
ctaggaccgaaggctcagccaacaagtgttttggatggactgtcttcctgtgatgaaatt
agcaatgaagatggggaggtcctcaatgtgggtgaagagatgaacaaggaacagtctgac
agtctgacagacagctgcttgcctcatgaggaagatatgataggccagacagacgattct
gtgccagattttgggaatttggagcaaacaaggaccttggtcgcatcactggaggcaggc
ttgagattctccaattgtgtgtccgccacaatgccaacccttgtccaattaatggcttcc
tcttctgccacagatgtggagaacacaattcttttactgatgagatgcagacagttccaa
atagatggttcagaagcctgcctccggaaaatgttgccactggtattttcacaagacaaa
acaatttatgaagctgttgagaatgcttttattacaatatatgtaaggaagagcccagag
gaaactgctaaaaatctcttgaatcttgctatcgatacaaatattggagatcttgcttca
ctggagttcctaattggagccttaatgtccaagggcgacttgacgagcagcacattgtca
gcattatgggatttcttctgtttcaatattgctggaacaactgcagagcaaagtcgtggt
gctttatctattttatgcatggcagcgaaaacatcaaattctgttctcagctctcactta
caagacatcattgacataggctttgggcgttgggcaaaagtggaacctttacttgctagg
acagcatgccttgctcttcagaggctgtctgaagaggacaggaaaaaattgttaaccact
aacggaaatcgggtttttagtatcttagaaagcttagttactggattttggcttcctgag
catatatggtatgctgctgcagatagagcaatagcttccatatatactatccatccgtat
cctgacaaaatggctgctgatctggtgaagaaagctcttagatctgtatttgattgcagt
ggaggggatgagctccaaaatggtagctccaacatgctaaccacagttcaagtgacaaaa
ctcagcaggcttctttttgttgtaagccatgtagctttgaatcaattggtttacattgag
tcttgggtccgcaagattcagaaagataaagcaaagagagagaaaatgattatggaggat
aagggtgattccacagataatactggtccaccgaaggataatggtatcaatgcagaacta
ggactagcagcttctgaagatgcattcctcgatacattatctgaaagagcagagaaagaa
attgtatccggacgttcctgtgaaagaaatttgattggccattgcgcaccttttctttct
aaactctgtaggaattacagtttgatgcagaagtaccctgaactacaagcatctggaatg
cttgcattatgccggtttatgataattgatgtcgacttctgtgatgcaaatctccagctt
cttttcactgttgtggagaatgcaccatccgaaacagttcgatcaaattgcactgttgct
ctcggagatctggcagttcgttttcctaatctcttagagccatggacagagaatatgtat
gcacgattaagagatccatcagtttctgtgcggaagaatgctgtattggttctttctcat
ctgatactgaatgacatgatgaaggtgaaaggttatataaatgaaatggccatctgtttg
gaagatgaagatgaaagaatttcaaatcttgccaaacttttctttcatgagttgtcaaag
aaagggaacaatccagtttataacctacttccagatatccttgggaagttatctgtccag
aatttgaaggaagaatctttctgcaacatcatgcaatttttaattgcttcaattaagaag
gacaagcaaatggaagctcttgtagaaaagctttgcaatagagtcagtggagttactgat
gttaggctatgtgaatacatctcctattgcctgtctcagctatcgtacactgataaaagc
atgagaaagttgatagagttgtttaagacttatgaacatgccttatctgaagactctgtg
atggataattttcgaactattatcaacaagggcaagaagttcgctaaacctgaactcaaa
tcatgcattgaggagtttgaagaaaagttgaataagttccacatcgagaggaaggaacaa
gaacttactgccaaaaatgctcaaagccaccaacagaaagttgagagcttggagagcatc
aaggtgactgtaaaagaagaagaggaaatcaatgaatctgaaatttctgaagattctgaa
gtcactaatccattaatggaagcgcaaacagaatgttcaccttcagaaccagcatgcgct
gagtcagaagcaaactctcatgcttcaagtgaggtgactgattcagcaattgatgaaaat
gaagttcaatcccctacaagtcgcaccagaggtgccactaaatccagagctaagagcagc
agtagaagttatcaaagccttgatacttccaattccacaagaagaataaccaggtccagg
cgaaggtcctaa
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