Solanum pennellii: 107031845
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Entry
107031845 CDS
T04130
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 36
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spen03009
]
107031845
Enzymes [BR:
spen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107031845
Ribosome biogenesis [BR:
spen03009
]
Eukaryotic type
90S particles
Helicases
107031845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SecA_DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
107031845
NCBI-ProteinID:
XP_015088818
UniProt:
A0ABM1HQC3
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All DBs
Position
10:complement(463319..470129)
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AA seq
488 aa
AA seq
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MEEEVQVDENFPLFSRKTKSATKKLVPAPTSIEETPKQLDKETNSGPTPSHITFSDLGLA
GWAVQTCNELGMKKPTPVQYHCIPRILSGQDVLGLAQTGSGKTAAFALPILHRLAEDPYG
VSCLVVTPTRELAFQLAEQFRALGSCLNLRCAVIVGGMDMITQTKTLMQRPHVVIATPGR
IKVLIEQNPDIPPVFSKTKFLVLDEADRVLDVGFEEELRAIFQCLPKNRQTLLFSATMTS
NLQTLLELSANKAYFYEAYEGFKTVESLKQQYIFIPKNVKDVYLQYILSKIKDIDVRSAI
IFVSTCRSCQLLGLLLEELEIDAAALHSYKSQSLRLSALHKFKSGQVPILVATDVASRGL
DIPTVDLVVNYDIPRYPQDYVHRVGRTARAGRGGLAVSFVTQNDVDLIHEIEAVLGKQLE
KFDCKENEVLDDISKVYKAKRVASMKMMDDGFEEKAESRKAQKQKMQNERKGKSKKQKRE
RVTKDIEV
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggaagtccaagtggatgagaattttcccttattctcccggaaaactaaatcg
gccacaaaaaaactcgttcctgctccaacctccattgaagaaaccccaaagcagcttgac
aaggagactaactctggtcctacccctagtcatatcaccttctctgacttaggcctcgcc
gggtgggctgtacagacctgtaatgagctgggcatgaagaaacccactcctgtacaatat
cactgtatccccagaatactctccggacaggatgtgttaggtttagctcagactggtagt
ggaaaaacagctgcatttgcattgcctattcttcatcgtttagctgaagatccttatggg
gtgtcctgtcttgtggttactccgacacgggagcttgcctttcagcttgccgagcagttt
cgggccctgggatcctgcttgaatttgcggtgtgctgtgattgtgggaggaatggatatg
ataacccagactaagactctgatgcaaagacctcatgtggtgatagcaactcccggaagg
attaaggttctcattgaacagaatcctgatattcccccagttttctccaaaactaagttc
cttgtcttggatgaagcagatagagttctagacgtagggtttgaagaggagttgagagca
atctttcagtgtttgccgaagaatcgacaaactcttctgttttctgcaacaatgactagc
aacctgcagacgctacttgagctttctgcaaacaaagcatatttctatgaggcatatgag
ggattcaagactgtagaatcacttaagcagcagtacatttttattccaaaaaatgtgaag
gatgtctatctgcaatacattttatccaaaatcaaagatatagacgttcgctctgcaatt
atttttgtttccacctgcaggagttgtcagcttttgggcttgttgttggaagaactcgaa
attgatgctgctgcattgcattcatacaagtcccagtcactgaggctttctgctcttcat
aaattcaaatctggccaggtcccaatattggtcgctactgatgtcgcgagtcgtggttta
gacattccaacagttgatctggtggtaaattatgacattccaaggtatccacaggattat
gttcatcgtgttggacgtactgcaagagctggacgaggtggacttgctgtcagctttgtt
actcagaatgatgtggatctcattcatgaaatagaagcggtgcttgggaaacaattggag
aaatttgattgtaaagagaatgaggtgcttgatgatatatcaaaggtttacaaggcgaag
cgtgttgcatcaatgaagatgatggatgatgggtttgaggagaaagcagaaagtcgtaaa
gcccagaaacagaaaatgcaaaatgagagaaagggaaagagcaaaaagcagaaaagagaa
agagtaacaaaagatatagaagtttga
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