Solanum pennellii: 107032085
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Entry
107032085 CDS
T04130
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like isoform X2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
spen
Solanum pennellii
Pathway
spen04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107032085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107032085
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107032085
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
107032085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_4
FAIM1
DUF7567
Motif
Other DBs
NCBI-GeneID:
107032085
NCBI-ProteinID:
XP_015089149
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All DBs
Position
10:3643824..3658575
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AA seq
317 aa
AA seq
DB search
MESDSIECIPSLDGIDVNEIVHSQLFSSSKTPHNNNNKNNNSIRPATSVHELLECPVCTN
SMYPPIHQCHNGHTICSTCKERVHNRCPTCRQELGDIRCLALEKVAESLELPCKYGSLGC
PEIFPYYSKLKHEAMCNFRPYNCPYAGSECSIVGDIPYLVAHLRDDHKVDMHSGCTFNHR
YVKSNPRQVENATWMLTVFNCFGQSFCLHFEAFQLGVAPVYMAFLRFMGDETDARNYSYS
LEVGGNGRKLIWEGTPRSIRDSHREVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGKIW
KEKRNPDGGACIPNLCS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagatagcattgaatgcataccatctttagatggtattgatgtgaatgagata
gtacattctcagttgttttcttcttcaaagacaccccataacaacaataacaaaaataat
aacagtatccgtccagcaacgagtgtccatgagcttcttgaatgccctgtttgtactaat
tcaatgtatcctccaatccatcagtgtcacaatgggcacaccatctgctcaacatgtaaa
gaaagggtgcacaatcgatgtccgacgtgtagacaggagcttggtgatattagatgctta
gcgctggaaaaggtggctgaatcgcttgagcttccttgcaaatatggctctcttggctgt
cctgagatatttccttattacagtaagctgaaacatgaggcaatgtgtaattttagacct
tacaactgcccgtatgctggctcagagtgctcaattgttggtgatattccttacttggtt
gctcatttgcgagatgatcacaaggtagacatgcattcaggttgcacttttaatcatcgg
tatgtcaaatcaaatcctagacaagtggaaaatgcgacgtggatgttaacggtttttaat
tgtttcggtcagtctttctgtctccattttgaagcctttcagcttggcgtggctcctgta
tacatggcatttcttcggtttatgggagatgagacagatgctcgaaactacagctacagc
cttgaagtcgggggcaatggaaggaaacttatctgggagggtaccccccggagcataaga
gatagtcatagggaagttagggatagccatgacgggcttattatacaacgtaacatggca
cttttcttctctggaggcgacagaaaagagcttaagctacgtgttactggaaaaatatgg
aaggaaaaacgaaatccagatggaggagcatgtataccaaacctatgtagttaa
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