Solanum pennellii: 107032286
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Entry
107032286 CDS
T04130
Name
(RefSeq) polygalacturonase-2
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
spen
Solanum pennellii
Pathway
spen00040
Pentose and glucuronate interconversions
spen01100
Metabolic pathways
Module
spen_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107032286
Enzymes [BR:
spen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
107032286
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
pAdhesive_6
Motif
Other DBs
NCBI-GeneID:
107032286
NCBI-ProteinID:
XP_015089361
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Position
10:complement(78417561..78424009)
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AA seq
457 aa
AA seq
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MAIQRNSILLLIIIFVSSISTCRSNVIDDNLFKQVYNNILEQEFAHDFQAYLSYLSKNIE
SNNNIEKVDKNGIKVINVLSFGAKGDGKTYDNIAFEQAWNEACSSKTPVQFVVPKNKNYL
LKQITFSGPCRSSISVKIFGSLEASSKISDYKDRRLWIAFDSVQNLVVGGGGTINGNGQV
WWPRSCKINKSLPCRDAPTALTFWNCKNLKVNNLKSKNAQQIHIEFESCTNVVASNLMIT
ASAKSPNTDGVHVSNTQYIQISDTIIGTGDDCISIVSGSQNVQATNITCGPGHGISIGSL
GSGNSEAYVSHVTVNGAKIIGAENGVRIKTWQGGSGQASNIKFLNVEMQDVKNPIIIDQN
YCDRVEPCIQQLSAVKVKNVVYENIKGTSATEVAIKFDCSKNFPCEGIIMENINLVRASG
KPSEAMCKNVHFNNAEHVTPHCPSLEISEDEALLYNY
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggctatccaaaggaatagtattctccttctcattattatttttgtttcatcaatttca
acttgtagaagcaatgttattgatgataatttattcaaacaagtttataataatattctt
gaacaagaatttgctcatgattttcaagcttatctttcttatttgagcaaaaatattgaa
agcaacaataatattgagaaggttgataaaaatgggattaaagtgattaatgtacttagc
tttggagctaagggtgatggaaaaacatatgataatattgcatttgagcaagcatggaat
gaagcatgttcatctaaaacacctgttcaatttgtggttcctaaaaacaagaattatctt
ctcaagcaaatcaccttttcaggtccatgcagatcttctatatcagtaaagatttttgga
tccttagaagcatctagtaaaatttcagactacaaagatagaaggctttggattgctttt
gatagtgttcaaaatttagttgttggaggaggaggaactatcaatggcaatggacaagta
tggtggccacgttcttgcaaaataaataaatcactgccatgcagggatgcaccaacggcc
ttaaccttctggaattgcaaaaatttgaaagtgaataatctaaagagtaaaaatgcacaa
caaattcatatcgaatttgagtcatgcactaatgttgtagcttcaaatttgatgatcact
gcttcagcaaagagcccaaatactgatggagtccatgtatcaaatactcaatatattcaa
atatctgatactattattggaacaggtgatgattgtatttcaattgtttctggatctcaa
aatgtgcaggccacaaatattacttgtggtccaggtcatggtataagtattggaagctta
ggatctggaaattcagaagcttatgtgtctcatgttactgtaaatggagccaaaattatc
ggtgccgaaaatggagttaggatcaagacttggcagggaggatctggacaagctagcaac
atcaaatttctgaatgtggaaatgcaggacgttaagaatcccataattatagaccaaaac
tattgtgatcgagttgaaccatgtatacaacagctttcagcagttaaagtgaaaaatgtg
gtgtatgagaatatcaagggcacaagtgcaacagaggtggccataaaatttgattgcagc
aaaaactttccatgtgaaggaattataatggagaatataaatttagtaagggcaagtgga
aaaccatcagaggctatgtgcaaaaatgtccattttaacaatgctgaacatgtcacacca
cactgcccttcactagaaatttcagaggatgaagctcttttgtataattattaa
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