Solanum pennellii: 107032476
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Entry
107032476 CDS
T04130
Name
(RefSeq) E3 ubiquitin-protein ligase RHF1A-like
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
spen
Solanum pennellii
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spen04121
]
107032476
Enzymes [BR:
spen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107032476
Ubiquitin system [BR:
spen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107032476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_UBOX
zf-RING_11
zf-RING_5
zf-C3HC4
zf-C3HC4_2
zf-ANAPC11
zf-Nse
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_Vps41
zf_RING_Vps8
zf-HC5HC2H
PHD_NSD
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
107032476
NCBI-ProteinID:
XP_015089599
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All DBs
Position
1:89111664..89117573
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AA seq
367 aa
AA seq
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MANDLETSPAAAASTVVDDSIEDACSICLEPFNSDDPPAVTDCKHEYHLQCILEWSQRSK
ECPICWRVLALKDSASQELLAAVEIERNMRSRINVRHTNENVEANHDATQQNDSDFEERI
MRHFAAATSRVRLVNRRRRQASSGIGPTQVVPSVPVGVSSNQTQNNESTVQFQGFGYFGD
GSAASATSSSIRPASSSVPAHGSDPSKLSQPPTYGPQGSSSSEFLAFSESIKSKWSSASA
RYKDSISKGTRGFKEKLLARNTTVKEFGREVQREMSAGIAGVSRMIERLDLTSKRTGAAE
PSACSMGTSNFPSRGVSEQGNVTFQAHDGCNKNATIGVTPTNPSLISSTNTNTSTGQMEI
SLGQNGN
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgatttggaaacatcgccggcggcagcagcatcgaccgtcgttgatgatagc
attgaggatgcttgtagtatttgtcttgagccgtttaactccgatgatcctcctgctgta
acagattgtaagcatgaatatcatttgcagtgtattcttgaatggtctcagagaagcaag
gagtgcccaatttgttggagggttcttgcattgaaagactctgcaagccaagagctacta
gctgcagtggagattgaaaggaacatgaggtcaaggattaatgtgcgtcatactaacgaa
aatgttgaagccaatcatgatgccacacagcagaatgattcagattttgaggagcgaatt
atgcgacattttgctgctgcgaccagtagagtccggcttgtcaacagaaggagaagacag
gcgtcttcaggaattggtcctacacaggttgtaccgtctgtgccggtaggagttagttca
aaccagacacagaataatgaatccacagtacagttccaaggctttggatattttggggat
gggtctgctgcttctgcaacttcatctagtattagacctgcatcatcatcagttcctgcc
catggaagtgatccttctaagcttagccaaccaccaacttatggtccccaggggtcaagc
tcatccgagtttcttgcattttctgaatctataaaatccaaatggtcttctgcttctgcg
aggtataaggactcaatctcaaaaggtactcgtggttttaaggaaaaattattagcacgc
aataccactgtcaaggaatttggcagagaagttcagcgtgagatgagtgctggaatagct
ggcgtttcaagaatgattgaacgacttgatcttacttcaaaacgtactggagctgctgag
ccatctgcatgtagcatgggtacctcaaactttcccagtagaggagtgagtgagcaagga
aatgtgacatttcaagcgcatgatggttgcaataagaatgctacaattggagtaactcct
actaatccctcattgatctccagcaccaacacaaacaccagcactggccaaatggaaatt
tctcttggacagaatggaaactga
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