Solanum pennellii: 107032484
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Entry
107032484 CDS
T04130
Name
(RefSeq) ATP-dependent helicase BRM
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
spen
Solanum pennellii
Pathway
spen03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107032484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spen03021
]
107032484
03036 Chromosome and associated proteins [BR:
spen03036
]
107032484
Transcription machinery [BR:
spen03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107032484
Chromosome and associated proteins [BR:
spen03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
107032484
Chromatin remodeling factors
BAF complex
107032484
PBAF complex
107032484
GBAF(ncBAF) complex
107032484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
QLQ
Bromodomain
AAA_14
Motif
Other DBs
NCBI-GeneID:
107032484
NCBI-ProteinID:
XP_015089575
LinkDB
All DBs
Position
1:96457910..96470066
Genome browser
AA seq
2239 aa
AA seq
DB search
MQSGGGAQQGGVAGAGGGHGRNTAASASASPTSSSSASHMGLDQQQLHQQHQRQSLQQQL
LRRPEGNEAILAFQTGSPHGILGGGNFVGPSGSMQLPQQSRRYIEQHDSPTIREDGQNRS
QGFEQPMLSPVQQAYLQYAFQAAQQKSALGMQHQQQMKMGMFGPSAKDQDPRLANMKIQE
LVSMQAPNQAQASSSKISSEQLFSRSEKQSDQGQQLMTDQRPDPKLPSQPTLLGQTVATK
PMQAPPSQQSMANMASNSLAMAAQMQAMQAMQALAYERNVDLSLPANANIMQQLIPLMQS
RMIAQQKVPENNVPVQSSSGHMPKQQVSSPQVANDSSPHAHSSSDLSGSSSAKTRQAVTT
GPLTASHSVASVNNPNNIPQQQFSAHGRENNLPPRQPIMASSGLPPMHYPQSSVNPNQGA
DNTSLPKPASNAQEILQTQYARQLSRPSSHSAASSPDGNSGNPLMSQGGNVRQVQPQLGF
SKQQLHVLKAQILAFRRIKKGDGTLPRELLQAIIPPPLDVQMQQTFPPGGIVNQEKTPGK
GSEDNRRPSEPSEKGPQLVVPSTGPNGSKEEVTREESTAAATATVPVPGSTTETKENASV
VLPGKEEQRIMGHTSKSDQDADHAIKNTAGRGDIAPDRGKAVASQVTGSDTTQVKKAMQS
SATQQKDTGPARKYHGPLFDFPFFTRKHDGFGPSMMMNNNNNLTLGYDIKDLLMEEGSEF
HKRKREESIKKIGDILAINLERKRIRPDLVLRLQIEEKKLRLAGIQARMRDEIDQQQQEI
MAMPDRHYRKFVRLCERQRQDLSRQVQASQKASREKQLKLIFQWRKKLLEAHWAIRDART
ARNRGVAKYHERMLREFSKKKDDNRNERMEALKNNDVERYREMLLEQQTNVPGDGAERYA
VLSSFLSQTEEYLHKLGGKITATKKQQEVDEAANAAAVAARAQGLSEEEVRAAAACAREE
VMIRNRFSEMNAPRDGSSVNKYYHLAHAVNERVIKQPSMLRAGTLRDYQLVGLQWMLSLY
NNKLNGILADEMGLGKTVQVMALIAYLMEFKQNYGPHLIIVPNAVLVNWKSEFLNWLPSA
SCIFYVGGKDQRSKLFSQEVCAMKFNVLVTTYEFIMYDRAKLSKVDWKYIIIDEAQRMKD
RESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSKPFQK
EGPTHNAEDDWLETEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPPKVSVVLRCRMSGFQ
SAVYDWIKSTGTLRVDPEDEKRRAEKNPNYQPKTYKVLNNRCMELRKTCNHPLLNYPYLN
VTKDFLVKSCGKLWILDRILIKLQRAGHRVLLFSTMTKLLDILEEHLQWRRLVYRRIDGT
TSLEDRESAIVDFNSPDTDCFIFLLSIRAAGRGLNLQTADTVIIYDPDPNPKNEEQAVAR
AHRIGQKREVKVIYLEAVVDKIASHQKEDEYRGGVVDSDDDLAGKDRYMGSIESLIRNNI
QQYKIDMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQETLHDVPSLQEVNRMIARS
EEEVEQFDQMDEEYDWEEEMTRYDQVPKWLRASSKDVNMAIANLAKKPSKNVLFSSGVGV
DSSGLAPESEKKRGRPKGKKVPIYTELDDDNGEFSEASSGERNGYSAHEDGEIGEFEDDE
FSGAVGVTPVNKDQSEEDGPSFADRYEYHQGPQGAIKTRVPDQLGSSGSSSDNQRPTQIV
SSSVSSQQKFGSLSALDARPSSRAKRMADELEEGEIAVSGDSHVDLQQSGSWIQDRDEGE
DEQVLQPKIKRKRSLRVRPRQATERPEEALIEKPAVQRGDSSQMAFQGDRRYDLQMRNDR
GHKTHAGPSGPKNNQNDASFKSKRSIPSRKSSSNSVKVYGSGKPGKVSRLSPDDAFEPTR
ESWDNTLMNASGTYSGGTKMSEVIQRKCKTVITKLQKKIEKGGHQIIPLLHGLWKRIGSS
GCMGGSEDSPFGLQTIDLRVDESEYSGVLEFVSDVQLMLKRAVQYFGFSHEVRSEARKVH
DLFFDILKIEFPETDFREARNSISFAGPAASTTPASSRLMPVGQNKRHKLINEMEPDSSP
LLKAQTRGTLHAGEDAKAKSHMAQRETRFGGSSSRELNQQDDSRPFTHPGELVICKKKRK
DREKLGLKPGSSSAGPVSPPGVSRSIRSPGSLPTVKEGGRLNQQTPQQLNASGSSSSVGW
ANPVKRLRSDSARRRQSHL
NT seq
6720 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctgggggtggagctcagcaaggtggtgtcgccggcgccggtggtggacatggg
cggaacacggcggcatcagcctcagcttctccaacatcatcttcttctgcctctcatatg
gggttggatcagcagcagctgcatcaacagcatcagcggcagtcattacaacaacagtta
cttagaaggcctgaaggaaacgaagctattctggccttccagactggcagtccccatgga
attttaggtgggggtaattttgttggaccttctggatccatgcagctgcctcagcagtcg
aggaggtatattgaacagcatgattctcccaccattcgagaggatggacagaacaggagc
cagggctttgagcaaccgatgttgagtcctgtccaacaggcatacctgcagtatgctttc
caggcagcgcaacagaagtccgctcttgggatgcaacatcagcagcaaatgaaaatggga
atgtttggcccttctgcaaaggaccaagatcctagacttgctaatatgaaaattcaggaa
ctcgtttccatgcaggcaccgaaccaggcccaagcatcatcatcaaagatatcctctgag
caacttttctctcgtagcgagaaacaatcagaccagggacagcagttgatgaccgatcag
aggccagacccaaagcttccttcccagccaacattgcttggccaaacggtagctacgaag
cccatgcaggcgccaccatctcagcaaagcatggcgaacatggcgagtaactctcttgct
atggctgcacagatgcaggcaatgcaggcaatgcaggctctggcttatgaacgtaatgtt
gatctgtcactacctgcaaatgctaacattatgcaacagctaattccgctcatgcagtcc
agaatgattgcccagcagaaagtgcctgaaaacaatgtgcctgttcaatcttcatcaggt
catatgccaaagcagcaagtttcatcacctcaagttgcaaatgacagttcgccccatgct
cattcttcaagtgatttgtcggggtcaagttctgctaaaactaggcaggctgttacaact
ggtcctctcactgcgtctcatagtgtagcttcagtgaataacccaaataatattcctcag
cagcagttttctgctcatggcagagagaacaatttgcctcctagacaaccaattatggct
agcagtggattacctccgatgcattacccacagtcatctgtaaacccaaaccagggtgcg
gataacacctcgctgcctaaacctgcctctaatgcccaagaaatcttgcagacgcagtat
gccagacagttgagtcgaccttcatcacattctgcagcttcttctccagatgggaactcg
gggaatccccttatgtctcagggtggaaatgtccgtcaggtgcaaccacaactgggtttc
agtaagcagcaactgcatgttcttaaagcccaaatacttgcatttagacgtataaagaaa
ggagatgggacattaccacgtgaattactccaagctataattccgccacctctggatgtg
caaatgcagcaaacatttcctcctggtggtatagtaaatcaggagaaaacaccaggaaaa
ggttcagaagataacagaagaccctcggaaccaagtgagaagggtcctcagcttgtagta
ccatctactggaccgaatggttcaaaggaggaggtcacaagagaggagagtacagctgcc
gcaaccgcaaccgtacctgtgccaggtagcacaactgagacaaaggagaatgcatcagtg
gttcttcctggaaaagaggagcagcgaatcatgggacatactagtaaatctgaccaggat
gctgatcatgctattaagaacactgctggcagaggtgatattgcaccagataggggtaaa
gctgttgcatcccaagttactggttctgatactactcaggtgaaaaaagctatgcagtct
agtgctactcaacaaaaagatacaggcccagctcgaaagtatcatggaccattattcgat
ttccctttcttcactcgaaagcatgatggttttggaccttccatgatgatgaacaacaac
aataatttaacattgggttatgatatcaaggatcttctaatggaggaaggctcagaattt
cacaagagaaaaagggaggaaagtataaagaagattggtgatatactagctattaattta
gagaggaaaaggattagaccagatcttgttctaagattgcaaatagaagaaaagaaactc
cgacttgctggtatacaggcaagaatgagggatgagattgaccaacagcagcaggagata
atggcaatgcctgataggcattaccgaaaatttgtaaggctgtgcgagcgtcaacgtcag
gatctatctaggcaagtgcaggcctcccagaaagctagcagagaaaaacaattaaaatta
atttttcaatggcgtaagaagcttcttgaggctcattgggcaatacgtgatgctcgaact
gcacgcaacaggggagtagctaagtatcatgagaggatgttgagggagttctcaaagaaa
aaggatgataaccggaatgaaagaatggaggcgttgaagaataatgatgttgagagatac
agggagatgttgctagagcagcagaccaacgttcctggtgatggtgctgagagatatgct
gttctttcatcatttttgagtcagacggaagagtatcttcataaattgggaggtaaaatt
acagccacaaaaaagcagcaggaggttgacgaggctgcaaatgctgctgcagttgctgca
cgtgcacagggcctctctgaagaagaagtaagagctgcagcagcctgtgctcgggaggaa
gtcatgattaggaatcgtttctctgaaatgaatgcacccagagatggttcatcagttaac
aagtattaccatcttgcccatgctgtgaatgaaagggttatcaagcagccttccatgtta
agagctggaactttgcgagactatcagcttgttgggttgcagtggatgctttctttgtat
aataataagctaaatggtatattggctgatgagatgggtctggggaagactgtgcaggtt
atggcattaattgcctatttgatggaattcaaacaaaactatggaccacatcttataatt
gtgccaaatgcagttctagttaattggaagagtgagtttctcaattggcttccatctgcg
tcctgcattttctatgttggtggaaaggatcaaagatcgaagttattttcgcaggaagtt
tgtgcgatgaagtttaatgtacttgtcactacgtacgagttcatcatgtatgatcgtgct
aaactttcaaaagtcgattggaagtatataataattgatgaagcacagcgtatgaaggat
agggagtcagttcttgctcgcgatcttgacagatatcgatgccaaaggcgcttgcttctc
acagggacaccattgcagaatgatctgaaggaattgtggtcacttctaaatctactactt
ccagaagtatttgataatcgcaaagcatttcatgattggttctctaagccctttcagaaa
gaaggtccgacacacaatgctgaagatgactggcttgagactgagaagaaggtcattgtt
atccatcgacttcaccaaattcttgagcctttcatgctcaggcgtcgtgttgaagatgtt
gaaggttcacttccacccaaggtctcagttgtcttaagatgcagaatgtcaggttttcag
agcgctgtttatgattggatcaagtctactggtacacttagagttgaccctgaagatgag
aagcgaagggctgaaaaaaatccaaattaccagcctaaaacatataaagttttaaataat
agatgtatggaacttcggaaaacttgcaaccatcctttgcttaactatccatatctcaat
gttacaaaggactttcttgttaaatcatgtgggaaattgtggattcttgatcgaatatta
attaaacttcaaagagcagggcacagggtgcttcttttcagtaccatgacaaaactgctt
gatatcttggaggagcatttgcagtggcgacgactcgtctatagaaggattgacgggaca
acaagcctagaggaccgtgaatccgctattgtggattttaatagtccagatactgattgc
tttatcttcttgctaagcattcgtgctgccggtcgtggattaaatctgcagactgctgat
actgtcatcatctatgatcctgatccaaaccccaaaaatgaggaacaggcagttgcaaga
gcccatcgtatagggcagaagagagaagttaaagtcatttacttggaggcagttgtggac
aaaattgcaagtcatcagaaagaggatgaataccgtggaggcgtagttgattctgatgat
gacctcgcaggcaaggaccgctatatgggatctattgagagtctcattcggaacaacatt
caacagtataagattgatatggctgatgaagttattaatgctgggcgttttgaccaaagg
actacacatgaagagcgacgtttgactttagagacattattacatgacgaggagagatat
caggagacacttcatgatgttccctctcttcaggaggtaaatcgcatgattgctaggagt
gaagaagaggtagaacaatttgatcaaatggatgaagaatatgattgggaagaggagatg
actagatatgaccaggttccgaagtggcttcgtgcttccagtaaggatgttaatatggcc
atagccaatctagcaaaaaagccctcaaagaatgtcttattcagtagtggtgttggtgtg
gactccagtggattagctcctgaatctgagaagaaaagggggcggcccaaaggtaagaag
gttcctatttacacagaattggatgatgacaacggtgagttctctgaagcaagttctggg
gagaggaatggatattcagcccatgaggatggtgaaattggggaattcgaagatgatgaa
tttagtggtgcagttggtgttacaccagttaacaaagaccagtcagaagaagatggtcct
agttttgctgatagatatgaataccaccaaggtccacaaggtgctataaagactcgtgta
cccgatcaattaggttcatcaggatcatcttcagacaaccaaaggccgacacagatagta
tcatcgtctgtttcatctcagcagaaatttggatctctttctgcattggatgccagaccc
agttctcgggccaaaaggatggcagatgaattagaggaaggagaaattgcagtatctgga
gactcacatgtggatctccagcaatctggtagttggatccaagatcgtgatgaaggtgaa
gacgaacaggtgttgcagcccaaaataaaaaggaaacgcagtctgagggttcgaccaagg
caggctacagaaaggccagaagaggcgctcattgagaagccagctgtgcagcgtggagat
tcttctcagatggcatttcaaggggatcgtagatatgatctccaaatgagaaatgaccgt
ggacacaaaacgcatgcagggcctagtggtccaaagaataatcaaaatgatgcatccttt
aagagtaagcgaagcataccttcaaggaaatcatcttctaattcagtgaaggtgtatggt
tcaggaaaacctggaaaagtcagtcgcttgtcccccgatgatgcttttgaacccacaagg
gaaagttgggataatacgctcatgaatgccagcgggacttatagtggagggactaagatg
tctgaggtcattcaaagaaagtgcaagactgtcattaccaaactccaaaagaaaatagag
aagggaggtcatcaaataattccgctgctacatggtctgtggaaaagaattggtagttct
ggttgcatgggtgggtcagaggatagtccgtttggtttacagacaattgatctacgcgtt
gatgagtctgagtacagcggagtgctcgaatttgtgtctgatgtgcagctgatgttaaaa
cgtgcagtacagtacttcggtttctcacatgaggtgagatctgaagcaaggaaagtacat
gatcttttctttgacatcttgaagatagaatttccggagactgattttcgagaagcaagg
aattccatttcttttgctggaccagcagcttctactacacccgcgtcttcacggctgatg
cctgtaggtcaaaacaagagacacaaactgataaatgaaatggaacccgactctagccca
ctgctgaaggcgcagacacgtggaacactccatgccggtgaagatgccaaggctaagagt
catatggctcaaagagaaacaagatttggtggtagcagcagccgggagcttaaccaacag
gatgattcacgcccattcactcatcccggggagcttgttatttgcaaaaagaaaagaaaa
gatagagagaagttgggtttgaaacccgggagtagttctgctggtcctgtctcaccacct
ggtgtcagccgcagtatcagaagtcctggctcactcccaactgtgaaggaggggggaagg
ttaaaccagcagacaccccaacagttgaatgccagtggtagcagcagctctgttggctgg
gcaaaccctgtgaagagattgagatcagattctgcaagaagacggcaaagtcatttatga
DBGET
integrated database retrieval system
