Solanum pennellii: 114073826
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Entry
114073826 CDS
T04130
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
spen
Solanum pennellii
Pathway
spen03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
114073826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spen03400
]
114073826
DNA repair and recombination proteins [BR:
spen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
114073826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
TED_complement
Beta-sand_ComC_2nd
Prominin
Motif
Other DBs
NCBI-GeneID:
114073826
NCBI-ProteinID:
XP_015077052
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All DBs
Position
6:complement(46210763..46223961)
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AA seq
258 aa
AA seq
DB search
MGSSSPQHTCLKLVISNKEQIFVKGTWFSSYFDLFITDGLHSWTCHASEEEVEERASQWD
QPVSEYIDLGEKYLGFQQPGSVYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQSSSNSKK
TTADILDFLMDSNIRLSDEVVSKTESFERMKVEAEKCLTQSEKLSKEKEEFESAIYAKFL
GVLNAKKKKLRELRDKLSKQATSVEEPVEEDAQSTDRTETFDEGSDEEISGEEVEKDDVG
TSKGVPARRGRGRGRKRK
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggggtcatcaagtccgcaacacacatgcctcaaactggtaatttctaataaggaacaa
atattcgtgaaaggcacatggttctcttcttactttgacctcttcatcactgacggcctc
cattcttggacttgccatgcgtctgaggaagaggttgaagagagagcatctcagtgggat
caacccgtttcggagtatattgatttgggtgagaagtatttaggatttcaacaacctggt
tctgtttatgggtttgatgatgctggtactgggcacaaaaggctctcatggacatttgag
aaagaaggaactaagctggaatggcggtggaaatgccaatcgtcgtctaatagcaaaaaa
actacagctgatatcttggacttcctcatggattcaaatattagactgagtgatgaagtt
gtcagtaaaactgagtcatttgagaggatgaaggtggaggcagaaaaatgtttaacacaa
agcgagaaactcagcaaagagaaagaagaatttgaatctgcaatatatgcaaagtttctt
ggagttctgaacgcaaagaagaaaaaactcagagaacttcgcgataagctctcgaaacag
gcaacctctgttgaagagccagtagaagaggacgcacaatctacggacagaactgagacc
tttgatgagggaagtgatgaggaaataagtggggaagaagtggagaaggatgatgttggc
acttcaaaaggtgttccagccagaaggggtcgtggtcgtggtcgaaagagaaagtaa
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