Solanum pennellii: 114076006
Help
Entry
114076006 CDS
T04130
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
spen
Solanum pennellii
Pathway
spen00040
Pentose and glucuronate interconversions
spen01100
Metabolic pathways
Module
spen_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
spen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114076006
Enzymes [BR:
spen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
114076006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
114076006
NCBI-ProteinID:
XP_027769996
LinkDB
All DBs
Position
2:complement(42618231..42620890)
Genome browser
AA seq
393 aa
AA seq
DB search
MTSSHFFFHFLSLFVIFLIIIKVSQVHGIGSVFNVQDFGASPDGKTDSSQAFLKAWDQAC
QNNGGGTVLIPIGTFLLNTLTLNGPCKGPMFFNINGLLKAPLGKVQDDYWLLFEHIDGLT
INGQGSLDGQGPSAWSMYNDNGPNPPSSIKFNSISNAFLQGITSINSKFFHFQINKSQGV
HFQNMTIIAPGESPNTDGIHIGDSNDITINKVNISTGDDCVSIGPGTFNVHISEVNCGPG
HGISIGSLGKYQNEGDVNGVIVTNCNIGKTQNGLRIKSWAPSPPSKVFNVTFVDINMNYV
ENPIIIDQHYCPHSSCKSQGESQVQISDVKFINVKGTSASKEAVVLDCSKSVPCQGIELR
GLQLTLDGQQSTFATCENANMKFNGPQIPSQCS
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgacttcttcccattttttctttcatttcctttctttgtttgtcattttcttgataata
attaaggtttctcaagttcatggtattggttcagtgtttaatgttcaagattttggtgct
agtcctgatgggaagactgatagtagtcaggcatttttgaaggcatgggaccaagcatgt
caaaacaatggaggaggcacagtccttattccaataggaacatttttgttgaatacatta
acacttaatgggccatgcaaaggcccaatgttttttaacattaatggacttttaaaagct
cctttggggaaagtccaagatgattattggttattatttgaacatattgatgggctgact
attaatggacaaggttcgttagatggtcaaggcccatctgcatggtccatgtataatgac
aacggcccaaatcctccttcgtcgataaaattcaacagcataagcaatgcttttctacaa
ggcataacatcaatcaacagcaagttcttccacttccaaattaataaaagccaaggagtt
cattttcagaacatgaccataatagcgccaggcgaaagcccaaatactgacgggattcat
ataggcgactccaacgatataactattaacaaagtaaatatttcaacaggagatgattgt
gtttcaattgggcctggtacttttaatgttcatatttctgaggttaattgtgggcctgga
catggcattagcattggaagtttaggaaaataccaaaatgaaggtgatgtgaatggagtt
attgtgacaaattgtaatattgggaaaactcaaaatggactaaggataaagagttgggca
ccttcacctcctagcaaagttttcaatgtcacttttgttgatattaatatgaattatgtt
gaaaatcctatcatcattgatcaacactactgtcctcactcttcttgtaaaagtcagggt
gaatcacaagtgcagatttcagatgtaaaattcataaatgtaaaaggaacttcagcatca
aaagaggcagtagtacttgattgtagcaaaagtgtaccatgtcaagggattgagctaagg
ggtttgcaattaactttggatggccaacagagtacctttgcaacttgtgaaaatgcaaat
atgaaatttaatggaccacaaattccttctcaatgtagttga
DBGET
integrated database retrieval system
