Thiospirochaeta perfilievii: EW093_02100
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Entry
EW093_02100 CDS
T06210
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sper
Thiospirochaeta perfilievii
Pathway
sper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EW093_02100 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sper03019
]
EW093_02100 (recQ)
03400 DNA repair and recombination proteins [BR:
sper03400
]
EW093_02100 (recQ)
Enzymes [BR:
sper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EW093_02100 (recQ)
Messenger RNA biogenesis [BR:
sper03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EW093_02100 (recQ)
DNA repair and recombination proteins [BR:
sper03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EW093_02100 (recQ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
QEN03540
UniProt:
A0A5C1Q911
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All DBs
Position
complement(470026..471807)
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AA seq
593 aa
AA seq
DB search
MNNRVFNTLQSVFGFSSFKKNQEAIVSSILDGRDVFAAMPTGGGKSLCYQLPSILLPGIT
VVVSPLIALMKDQVDSAVQIGISAAYINSSLDKDKTIQIYRDLQKNKIKLLYISPERFAL
TTFIQTLSQLNISLFAIDEAHCLSDWGHDFRPDYLSLTNIRKFFPNTVIAAFTATATKQV
QSDIIYKLDLIRPFITRASFDRPELSYRVVRKSKTKDQLLKLTKDRVGKAGIIYRTSRND
VEKTAAFLVANGIKALPYHAGLEERVRTGNQEKFNCDETDVIVATIAFGMGIDKSNIKYV
IHGDLPKNIEGYYQETGRAGRDGSDSECILLFSRGDSVKINYFINKIEDIHEQEKSRHNL
NKILRYASRNVCRRKQLLSYFEEEHPGNCNNCDVCNNENELIDITVDSQMILSAIARTGQ
KFGINHTIDVVRGSKSSKILKFEHDKIKTFGIGKSKTKEFWHLVIDELLGQECLIQDSER
YNALVISEKGTDLLYGRIKTTMFKPVIEKSKKSREAITLTKDEELFERLRRVRLDIAKEK
NVPPYVVFSDKTLTDMSNLKPRNSEEFLLVNGVGEKKLESYGDQFLGIIIKYL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
gtgaataatagagtttttaatacattacagtcagtatttggattttcatcctttaaaaaa
aatcaagaagcaattgtctcttctatattagatggtagggatgtttttgctgcaatgcca
acagggggaggtaaatctctctgttatcaactaccctcaattttattaccagggattaca
gtagttgttagtccattaatagctttaatgaaggatcaggttgattctgctgtacaaatt
ggaatatctgcagcatatataaatagttcccttgataaagataaaactattcagatatat
agggatttacaaaaaaataagataaaacttttatatatctcaccagagagatttgctcta
acaacatttattcagactctaagtcagttaaatatatcactttttgcaattgatgaagcc
cattgtttatcagactgggggcatgattttcgacctgactatttatcccttactaatata
aggaagtttttcccaaatacagtaattgcggcttttacagccaccgcgactaaacaggtt
caatcggatattatttataagctagatctaattagaccttttataacaagggcttcattt
gatagacctgagttatcctatagggttgtaagaaaatcaaaaacaaaagatcaactgctt
aaacttacaaaggatagagtcggcaaagctggtataatttatagaacatcaagaaatgat
gtagagaaaaccgcagctttccttgttgctaatggaataaaagcacttccatatcatgcc
ggtttagaagagagagtaagaacagggaatcaagaaaaatttaactgtgatgaaaccgat
gtcattgttgcaacaattgcatttggaatgggcattgataagagtaatattaagtatgta
atccatggagacttaccaaaaaatattgaagggtattatcaagagaccggtcgtgcaggt
cgagatggatcagactcagagtgtatactactttttagtcgaggtgatagtgttaaaata
aactactttattaataaaattgaggatattcatgaacaggagaagtctagacataatctt
aataaaatacttagatatgcttcaaggaatgtctgcagaagaaagcaacttttaagttat
tttgaagaggaacacccaggaaactgtaataattgtgatgtttgtaacaacgaaaatgag
ttaattgatataactgtagactcccagatgattttatctgctattgctagaacaggtcaa
aagtttggaataaatcatactattgatgtagtaagaggttctaagagtagtaaaatttta
aagtttgaacatgataaaattaagacttttggtataggtaaaagtaaaacaaaagagttt
tggcacttagtaatagatgagttattaggtcaagagtgcctaattcaggatagtgaaagg
tacaacgctttagttatatctgaaaaggggacagatcttctatatggacgaataaaaacc
actatgtttaaacctgtaattgagaagagtaaaaaaagtagggaagctataactttaact
aaggatgaagaactatttgaaagattacgaagggtaagattagatattgctaaggagaaa
aacgttccaccatatgttgttttctcagataagactttaacagatatgagtaatttaaaa
cctaggaactcagaagaatttttattagtaaatggtgttggagagaagaaactggagagt
tacggagatcaattcctaggaataattataaaatatttgtag
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