Thiospirochaeta perfilievii: EW093_08725
Help
Entry
EW093_08725 CDS
T06210
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sper
Thiospirochaeta perfilievii
Brite
KEGG Orthology (KO) [BR:
sper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sper03032
]
EW093_08725 (gyrB)
03400 DNA repair and recombination proteins [BR:
sper03400
]
EW093_08725 (gyrB)
Enzymes [BR:
sper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EW093_08725 (gyrB)
DNA replication proteins [BR:
sper03032
]
Prokaryotic type
DNA Topoisomerases
EW093_08725 (gyrB)
DNA repair and recombination proteins [BR:
sper03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EW093_08725 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
GerD
Motif
Other DBs
NCBI-ProteinID:
QEN04784
UniProt:
A0A5C1QDH7
LinkDB
All DBs
Position
1916125..1918035
Genome browser
AA seq
636 aa
AA seq
DB search
MQNDNYDAQNIQILKGLEAVRKRPGMYIGSTDATGLHHLVYEIVDNSIDEALAGYCDTIK
VEILEDNIIRVTDDGRGIPVDYHEAEGMSALEVIMTKLHAGGKFDNSTYKVSGGLHGVGA
SVVNALSTYCTVDVHKDGKKYTQTFNKGITKGPIEIVGETSFRGTVTTFKPDDTIFTDLE
YSFDILANRLREQAFLNKGINIELVDTRLEVPRESKFYFEGGVKSFVEYLNKSKTVINPE
PVYVEFEKDQVILQLAMQYNDGYSENIYTFVNNINTRDGGTHLSGFKSALTRTLNDFLKK
SKLNKKVDSSLSGDDTREGLTAVISIKIPNPQFVGQTKDKLGNAEVRGIVDSIVFERLTT
YFEEFPEVVDRIIEKSILAAKARAAAKRARELTRRKDVFETGGLPGKLADCANRDPSKCE
VYIVEGDSAGGSAKMGRDREFQAILPLWGKMLNVEKTRIDKVLGNEKLTPIIQALGANVG
TSFDVEKLRYHKIIIMADADVDGSHIRTLLLTFFFRYMTPLLEKGFIYLAMPPLYKIQHG
KHIEYVYDDKEKDIYLKNCGIDEDKLNIQRYKGLGEMNPDQLWETTMDPSRRNIKRIKME
DAIAADEIFVTLMGEEVPPRRKFIEDNALSVANLDI
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatgataattacgacgctcaaaatattcaaattttgaagggtctagaagctgta
cgtaaaagaccaggtatgtatataggatctactgatgctacaggactccaccatctagtt
tatgaaattgtagataatagtattgacgaagcattagctggttactgtgatacaattaaa
gtagagatcttagaagataatattattagagttactgatgacggacgtggtatacctgtt
gattaccatgaagcagagggtatgagtgctcttgaagttattatgacaaagttacacgca
ggtggtaaatttgataatagtacatacaaagtttccggtggtttacatggggttggtgcc
tcagttgtaaatgctctatctacttattgtactgtcgatgttcataaagatgggaaaaaa
tacactcaaacttttaataaaggtataacaaagggacctatagagattgttggtgaaaca
tcttttagaggaactgtaaccacttttaaaccagatgatactatattcacagatttagaa
tatagttttgatattttagccaatagattaagagaacaagcttttctaaataaaggtata
aatattgaattagtagatacaaggttagaagtacctagagaatcaaaattttattttgaa
ggtggagtaaaatcctttgtagagtatttaaataaatctaaaacagttataaatccagaa
ccggtttatgttgagtttgaaaaagatcaagtaatcttacaattagcaatgcagtataat
gatggttattcagaaaacatttatacttttgttaacaatataaatactagggatggagga
acccatttatctggttttaaatcagcattaactagaactttaaatgattttttaaaaaaa
tcaaaattaaataagaaggttgattctagtttatctggtgatgatacaagagaggggtta
actgcagtaatttctattaaaattcctaatcctcaatttgttggacagactaaggataaa
ttaggaaatgctgaagtgcgtggaatagttgattccatagtttttgaaagattaaccact
tattttgaagagtttccagaagttgtagatagaataattgaaaaaagtattttagcagcg
aaggctagggctgcagctaaaagagctagagagttaactagaagaaaagatgtttttgaa
actggtggtctaccaggaaaattagctgactgtgcaaatagagatccttctaaatgtgaa
gtttatatagtggagggagactctgccggtggttctgctaaaatgggtagagatcgggag
ttccaagctatattacctctttggggaaaaatgctaaatgttgaaaaaactagaattgat
aaagttttaggtaatgaaaaacttacaccaattatacaggctttaggtgcaaatgttggt
actagttttgatgttgaaaaactaagatatcataaaattattattatggccgatgcagat
gttgatggatcacatattagaactttattattaacattcttttttagatatatgacacca
cttttagaaaaagggtttatttatttagcaatgccacctctttataaaattcaacacggt
aagcatattgagtatgtttatgatgataaagagaaggatatatatcttaaaaattgtggt
atagatgaagataagcttaatattcaacgttataaaggtctaggtgagatgaatccagat
caactttgggaaacaacaatggacccttctagaagaaatattaaaagaattaaaatggaa
gatgctatagcggcagatgaaatttttgtaactttaatgggtgaagaagttccaccaaga
agaaaatttatagaagataatgcactttctgttgcaaatctagatatttag
DBGET
integrated database retrieval system
