Thiospirochaeta perfilievii: EW093_10155
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Entry
EW093_10155 CDS
T06210
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sper
Thiospirochaeta perfilievii
Pathway
sper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EW093_10155 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sper03019
]
EW093_10155 (rny)
Messenger RNA biogenesis [BR:
sper03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EW093_10155 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
KH_NusA_C
FUT8_N_cat
LapA_dom
V_ATPase_I
HHH_6
DUF4238
Motif
Other DBs
NCBI-ProteinID:
QEN05055
UniProt:
A0A5C1QAH2
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All DBs
Position
2215590..2217122
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AA seq
510 aa
AA seq
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MPYWVMILSCSLVGVLIGWLLRLAYAKYQLSSSEQRAIRLKQDAKIEAERQKNEYLLEGK
DQLHRERKQQDKEIRERQKELQKYEKRIQTKEDSLEKKLSDIETQQKTITSKEVELNEKS
NNITKLEDELKLELEKVSGLTREEAKRIIVERVENDAKHDAQALVNKIEQEAKDTAEKKA
REILVSTIQRIATDVTSDVTVTSVSLPSDEMKGRIIGREGRNIRTLETLTGVDIIIDDTP
EAVVISCFDPIRKVIAKKSLERLISDGRIHPARIEEVVQKVAAEINQIIIEEGEKLLFDL
GVHNIPREGVKALGRLYFRTSYGQNILDHSKEVAVLAGMIAAEVGADRELAKRGALLHDI
GKGLETDGEGNHAELGAEFCKRMGEKPLVVNAVAAHHNDVEFGSLEAIIVQLADAISASR
PGARRESLDNYIKRLENLERIAESFTGVEKCFAIQAGRELRILVNSDTVTDKDALPLAKE
IAKQIETELTYPGRIRVAIIRETRAIEYAR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgccatattgggttatgattttaagttgttccctcgttggtgtgttaattggttggcta
ttaagattagcctatgcaaaatatcaattgtcatcttctgagcaaagggctattagatta
aagcaagacgcaaagattgaagctgaaagacaaaaaaacgagtatttacttgagggtaaa
gaccaacttcatcgcgaacggaaacaacaagataaagagattagagaaagacaaaaagag
ttacaaaagtatgaaaagagaatacaaactaaggaagattcattagaaaaaaaactttca
gacattgaaactcaacagaaaacgattacctcaaaggaagttgaacttaatgagaaatcc
aataacattactaagttagaggatgaattaaaacttgaactagagaaggtttctggtctt
acaagggaagaggcaaagagaattattgttgaaagagttgaaaatgatgcaaagcatgat
gctcaagctcttgttaacaagattgaacaggaagctaaggatactgctgagaaaaaagct
agagaaattcttgtttctacaattcaaagaattgctactgatgtaacaagtgatgtaacg
gtaacttctgttagtctacctagtgatgagatgaaaggtcgaattattggtagagaaggt
agaaacattagaactttagagacattaactggagttgatattattatagatgatacacca
gaagctgttgttatctcatgttttgatccaattagaaaagttattgctaaaaagtcatta
gagagacttatctccgatggaagaatacatcctgcaagaattgaagaagttgttcaaaaa
gtagctgctgagattaaccaaattataattgaagagggtgaaaaacttctatttgatcta
ggtgtacacaatattcctagagagggtgttaaagccctaggtagattatactttagaaca
agttatggacaaaatattcttgaccactctaaagaagttgctgtattagcaggaatgata
gctgctgaagttggtgctgatagagaacttgctaaacgtggtgcacttcttcacgatatt
ggtaagggattagagaccgatggagagggtaaccatgctgagttaggtgcagagttctgt
aaacgaatgggagaaaaaccacttgttgtaaatgcagttgctgcccaccataatgatgta
gagtttggatctttagaggctataatagtacaacttgccgatgcaatttctgcttctaga
cctggtgctagacgggagagtttagataactatattaaacgtttagagaaccttgaaaga
attgcagagagctttacaggtgttgagaagtgttttgctatacaagctggacgtgagctt
agaatattagttaacagtgatactgtaactgataaggatgctctaccactagctaaagag
atagctaaacagattgaaacagaattaacataccctggaagaattagggttgcaataata
agagagactagagcaatagaatatgccagatag
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