Thiospirochaeta perfilievii: EW093_10810
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Entry
EW093_10810 CDS
T06210
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sper
Thiospirochaeta perfilievii
Pathway
sper03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sper00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EW093_10810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sper03021
]
EW093_10810
03400 DNA repair and recombination proteins [BR:
sper03400
]
EW093_10810
Enzymes [BR:
sper01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EW093_10810
Transcription machinery [BR:
sper03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EW093_10810
DNA repair and recombination proteins [BR:
sper03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EW093_10810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_A_bac
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QEN05180
UniProt:
A0A5C1QDN2
LinkDB
All DBs
Position
2363486..2364526
Genome browser
AA seq
346 aa
AA seq
DB search
MARKSLLKGLKKPKGISFEHSETTPNYGKFAAYPFERGYGATLGNTLRRVLLSSIQGHAV
TSVRITSFDNEGTSKVIASEFESIPHVVEETPIFLANLKRLQLSLPEDVEQLTILVEYSG
EGQLTGANLEKDGIEVFNKDLVLCNTMPDANFEIEVQVELGRGYVPSELNEKYIDVVGTI
PMDSDFSPIRKVQYNIENTRVGDRSDFDKLVFELWTDGSIKPEDAIAEAAKIIKDQFTVF
INFDENCIEGEEERDEEQEKINELLATPVEELELSVRSSNCLKNAQIKTIGELTTKTEDE
IAKTRNFGKKSLLEIKDKLKDWNLSLGMTDYSVLKNTIKLEKNKED
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggctagaaaatctttacttaaaggtttaaagaaaccaaaaggtatatcatttgaacat
tcagagacaactcctaattacggaaagtttgcagcttatccgtttgaaaggggatatggt
gcaactcttggtaatactttaagaagggttcttctttcctcaatacaggggcatgcggtt
acatcagtacgtataaccagttttgataatgaaggaacatctaaagttattgctagtgag
tttgaatcaattccacatgttgtagaagagactccaatttttttagcaaacttaaaaaga
ttgcaactgtcccttcctgaggatgtagaacaactaacaattttagttgaatactctgga
gagggtcaattaactggagcaaatcttgaaaaggatggaattgaagtttttaataaagat
ttagttctttgtaacacaatgcctgatgcaaactttgaaattgaagttcaagtagagtta
ggtaggggttatgttccttctgagttaaatgaaaagtatatagatgttgttggaacaatc
cctatggattcagacttttcaccaataagaaaagttcaatataacattgagaatacaaga
gttggtgatagatcggattttgataaattagtatttgagttatggactgatggttctatt
aaaccagaagacgctatagctgaagctgctaagattattaaagatcagtttactgtattt
attaattttgatgaaaattgtattgaaggtgaagaagagagagatgaagaacaggagaaa
attaacgaattgttagctactccagttgaagaacttgaactttcagttagatcaagcaat
tgtctaaaaaatgcacaaattaaaacaattggtgaattaactactaaaactgaagatgag
attgcaaaaacaagaaactttggtaaaaagtctcttttagaaattaaagataagcttaag
gattggaatttatcactaggtatgactgactatagtgtactaaaaaatacgattaagctt
gaaaagaataaggaagattag
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