Thiospirochaeta perfilievii: EW093_13655
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Entry
EW093_13655 CDS
T06210
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sper
Thiospirochaeta perfilievii
Pathway
sper03030
DNA replication
sper03430
Mismatch repair
sper03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EW093_13655
03430 Mismatch repair
EW093_13655
03440 Homologous recombination
EW093_13655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sper03032
]
EW093_13655
03400 DNA repair and recombination proteins [BR:
sper03400
]
EW093_13655
Enzymes [BR:
sper01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EW093_13655
DNA replication proteins [BR:
sper03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EW093_13655
DNA repair and recombination proteins [BR:
sper03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EW093_13655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
T2SSK
Motif
Other DBs
NCBI-ProteinID:
QEN05713
UniProt:
A0A5C1QC96
LinkDB
All DBs
Position
complement(2957630..2961064)
Genome browser
AA seq
1144 aa
AA seq
DB search
MRDFVHLHNHSDYSLLDGAVTINGLVEMAKKYDMKHLALTDHGNLFGSLRFESACKKAGI
NPIIGCEVYIAPGKRQDKDSTKKKYYHMILLCKNEIGFKNLTAIVSQAYIDGFYYKPRID
DELLEKYSEGLICTSACLAGEISQNILNNNYEKAKERALYYNSLFEEDSYYLEVMNHELP
EEKIVIEGMKKLSKETGIPLVATNDIHYQKKEHANAQDILICIGTNKKKNEAKRMKMHGS
HLYFKSPQEMNELFKDIPEALDNTVKIANMCNVTIPQPGPILPDYEIPSEFENQAEYLTH
ITWEGIKMRYKEVTDEVKKRTEYELGILLGMGFEGYFLIVWDFIDWAKKHDISVGPGRGS
GAGSIIAYAIGITDIDPLKYELLFERFLNPDRVSMPDFDVDFCFERRGEVINYVTEKYGR
EQVGGICTFGTLKTKAVLKDVARVLDIPFAESNAISKLLPEGKAPDGRKINVDVALEITP
ELQEYKNRGGIYKELFETASILEGMNRHVSTHACGMVIGKTKLTDYVPLYKDQKTGAVSS
EYTMDIIEPCGLVKMDFLGLKTLTLLSNTEKLVRKHNKDFKVDDVPIDDEKTYRMLQDGK
SSAVFQFESAGMQDILRRAKPDNIEDLIALNALYRPGPMQYIPQFIDSKMGKMQIKYPDP
LLEETLKPTYGVIVYQEQVMKVAQIIGGFSLGKADILRRAMGKKKVAEMDKMKVEFIKGA
KELGHTEEHASEIFDMLVPFAGYGFNKSHAAAYSVVAYKTAYCKANYPAEFMAANLTNEI
SNPTAFSDYLSECKEMGIELAPPDINDSEKYFTVVDGKIVYGLTGMKGIGSAAVDAIITA
RQKKGKFENFEDFIEKVELRAVNSRVLEVLITSGLFSKIEKHNRATIMNNCEKIITTIQK
KLESTQFGQGSLFGDIEEQIFPDIVWDEVEEYPELELLKMEKENIGFFFSGHPMDKYKDQ
WKRTVNLDLSNPKTASGDKTYSILGMIKNPKSITTKSGKRMAFAELEDYNGSIELVLFAK
KFEQYGHLLQPDAVLGITGNVDTSRDKPSFKVEEIKDPDELKELIAPEIHMEFHPEDLSE
DELEHLRTYIMDNKGNSQVYFHIKRPGQVREVVIRISSQLTINGGDTTLIELRNLPKVKN
VWRE
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgagagattttgtacacctacataaccattcagactactccctcttagatggagcggta
actataaatggcctagtagaaatggctaaaaaatacgatatgaaacatcttgccctaact
gatcatgggaatctatttggttccttaagatttgaatcagcctgtaaaaaggccgggatt
aacccaattattgggtgtgaagtatatatagccccagggaagaggcaggataaggattca
accaaaaaaaaatactaccacatgatacttctatgtaaaaatgagataggatttaaaaac
ctaacagctattgtttcccaagcgtatattgatggattttattataaacctagaatagat
gatgagcttttagagaagtattctgaaggattaatatgtacttcggcatgtttagccgga
gagatttcacaaaatatactaaataataactatgagaaggctaaggagagagccctatat
tacaactctctatttgaggaggatagctactaccttgaagtcatgaatcatgaacttcct
gaggagaagatagttatcgaggggatgaaaaagttatcaaaagagactggaattcccctt
gttgcaaccaatgatatccactatcaaaaaaaagagcacgcaaatgcccaggatatatta
atatgcattggtacaaataagaaaaaaaatgaagctaagcgtatgaagatgcacggctcc
cacctatattttaaatccccccaggagatgaatgaactatttaaggatattcctgaggcc
ctagataatacggttaaaattgccaacatgtgtaatgttacaattccacaacctggacca
attttacctgactacgaaataccatccgagtttgaaaatcaggcagagtatctaacccat
ataacatgggaaggtattaagatgaggtataaagaagtaactgatgaagttaaaaagcga
actgagtacgagcttggtattctattaggaatgggttttgaaggttactttttaattgtt
tgggattttatcgactgggcaaaaaaacacgacatctcagttggaccgggacggggttca
ggtgcaggttctattattgcctatgccataggaattacagatattgacccacttaaatat
gagctactctttgagcggtttttaaacccagatagggtttcaatgccggattttgatgtt
gacttctgttttgagagacggggagaagttattaattacgtaacagagaagtatggtcgg
gagcaagttgggggtatatgtacctttggaacacttaaaacaaaggctgtattaaaggat
gtagccagggttttagacattccatttgctgaatcaaatgctatatccaaactactacct
gagggtaaggccccagatggaagaaaaataaatgtagatgtcgctttagagataaccccg
gaactccaggagtataaaaacagaggtgggatatataaagagctatttgaaacagctagt
atattagagggtatgaacaggcatgtatctacccacgcctgtggaatggttattggaaaa
actaaacttacagactatgtacccctatataaagatcagaaaaccggggctgtatccagt
gagtatacaatggatattattgaaccctgtggactagtaaaaatggacttcttaggtctt
aaaacactaacccttctttctaatacagagaagttagtaagaaagcataataaggatttt
aaggtagatgatgtcccaatagatgatgagaaaacctacaggatgttacaggatgggaaa
agtagtgctgtattccaatttgaaagtgctggaatgcaggatatcctccgtagggcaaaa
ccagataatatagaggatttaattgccctaaatgccctatatagaccgggacctatgcag
tatattccccagtttatcgattctaaaatgggtaagatgcagataaaataccctgacccc
ctactagaggagacactaaaaccaacttatggagttattgtataccaagagcaggtaatg
aaggttgcccaaataataggtggtttcagtcttggtaaagcggatattttacgtcgtgcc
atgggtaaaaagaaggttgcggagatggataagatgaaagtcgaattcattaaaggagct
aaggagttaggacacaccgaggaacatgcatcagaaatatttgatatgctagtacccttt
gccggctacggttttaataagtcccatgctgcagcctactcggtggttgcatataaaaca
gcctactgtaaggcaaactacccagccgagtttatggctgcaaaccttacaaatgaaatt
tccaacccaacagccttttctgactacttaagtgagtgtaaagagatgggtatagagtta
gccccacctgatattaatgactcggagaagtactttacagttgtagatggtaaaattgtc
tacggtttaactggaatgaagggtataggatcagccgctgttgatgctattattaccgcc
cgccagaagaagggtaagtttgaaaactttgaagattttatcgagaaggttgaactaaga
gctgtaaattctagggttctagaagttctaataacttctggtctttttagtaaaatagag
aagcataatagggcaactattatgaataactgtgaaaaaattataacaactattcagaaa
aaattagagagtacccagtttggtcaaggctccctatttggagatatagaggagcagata
tttccagatattgtatgggatgaagttgaagagtatccagaattagagctacttaaaatg
gagaaagagaatattggtttcttcttctcggggcaccctatggataagtataaagaccag
tggaaaagaactgtaaacctggatttaagtaaccccaaaacagcctctggggataagaca
tactctattttaggaatgataaaaaatccgaaatccataacaacaaagagtggaaagaga
atggcatttgcagagcttgaggattataatggttccatagagctagtactatttgccaag
aagtttgaacagtatggacaccttctacagccagatgctgttttaggaataacaggaaat
gtagatacatctagggacaagccatcttttaaagtcgaggagataaaagatcccgatgag
ttaaaagagcttatagctcctgagatacacatggagttccaccctgaggatttatccgag
gatgagttagaacatctaagaacttatattatggataataagggaaatagccaggtctac
tttcatattaaaagacccggtcaggttagggaagttgtaattagaatatctagccaactt
actataaatggtggtgatactactcttatagagctacgaaacctaccaaaagtaaaaaac
gtctggagagaatag
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