Thiospirochaeta perfilievii: EW093_15825
Help
Entry
EW093_15825 CDS
T06210
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K19223
peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
Organism
sper
Thiospirochaeta perfilievii
Brite
KEGG Orthology (KO) [BR:
sper00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sper01002
]
EW093_15825
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sper01011
]
EW093_15825
Peptidases and inhibitors [BR:
sper01002
]
Cysteine peptidases
Family C40
EW093_15825
Peptidoglycan biosynthesis and degradation proteins [BR:
sper01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
EW093_15825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
Amidase_3
LysM3_LYK4_5
LysM_RLK
Motif
Other DBs
NCBI-ProteinID:
QEN06090
UniProt:
A0A5C1QG21
LinkDB
All DBs
Position
complement(3412050..3413996)
Genome browser
AA seq
648 aa
AA seq
DB search
MKRLLSLLLLLLVTFFIYSDTIIHIVERGDTLFGLSLKYEVPTNIIKIENGLESDNLYIG
QKINITKLKPDRYKVLPGDSLSSIAYNHDITLKHLLLVNRIADDYSLKIGETLIVPTTPE
KKREYIVKKGDTLSWISMTYNIDIEKIKRLNKIQDGSLVVGQELKLISSDKPEKIVKQAA
VSLNLIDNEEVLKDKGLKYIIKAGDTLSAIALEYQTSVSDISSLNNLNSTNIKIGDTIYL
PSYAKKREPIDYNIYHIVEKGDTLSQIALDYNISETLLREINHLDSDKIKIGDSIKLIPQ
ESRTYRVLKGDTLWSIAQKHDISVDQLMQYNHLNSTLVPEGKLLTLYDYSVVTHTQEEDN
FSLVSFKYKHNTTLSQPYKSYSIDQLKNPLDKYNKAKENWKNFSKLISNEEQMSNDLEGW
TVILDPGHGGKDPGAIATVTLNGKKRYIVEDEYAYDTAVRLYELLKRNGADVYMTILSPD
HIARNPSDNATTFINEKNEVYNDYKLNSYNNSTVWPVGGQWGLEQRVKITNNILSVSKNK
KTIFISIHADNDVDRDVGKLVLYSERNSIEDQKSKDFANYLLPSLGDNATADGMTLAVLH
NNNADVKVLIELRNMAHLKEAMALLDNNKRQEDALMILNGIKNYTKKH
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagactgctgtccctacttttgttactattagtaacattttttatatattcagat
acaataattcatatagttgaaaggggtgataccctttttggcttatcattaaaatatgaa
gtacccactaatattattaagattgagaatggcttagagtctgataatctatatattgga
cagaagattaatattacgaaactaaagccagatagatataaggtactacctggagactca
ctctctagtattgcatataaccacgatataacccttaaacacctattattagtaaataga
atagctgatgattattctctaaaaattggggagacactaatagtacctacaactcctgaa
aaaaaaagagagtatatagtaaaaaaaggggatacattaagttggatctcaatgacttat
aacattgatattgaaaaaataaagagacttaataagatacaagatggaagtctagttgta
ggccaagagttaaaactgataagtagtgataaaccagagaaaatagtaaaacaagctgca
gtttcattaaacctaattgataatgaagaagttttaaaagataaggggttaaagtatatt
ataaaagcaggggataccctatctgctatagctttagagtaccaaacatctgtttctgat
ataagtagccttaacaatcttaatagtacaaatataaaaataggagatactatctaccta
cctagttatgcaaaaaagagagaaccaattgattataatatctaccatattgtagaaaaa
ggagacaccctctcccaaatagctttagattacaatatatctgaaactctactaagggaa
ataaatcacctagatagtgataaaattaagattggagactctataaaacttataccccag
gagagtagaacctacagggttttaaagggtgatactctttggtctattgcacaaaaacat
gatatttcagtagaccaacttatgcagtacaaccacttaaactcaactctagtaccagag
ggtaaactgttaacgctttatgattatagtgtagtaacccatacccaagaagaggataac
tttagccttgtctcatttaaatataaacacaatacaacactctcccaaccctacaaaagt
tactctatagatcaacttaaaaacccccttgataaatataataaagctaaagagaattgg
aaaaacttttcaaaattaatatcaaatgaagagcagatgtcaaatgatctagaaggatgg
acagttatacttgatccaggacatgggggaaaagaccctggagcaattgcaacagttact
ttaaatggaaaaaagagatacattgtagaagatgagtacgcctatgatactgctgttaga
ctatacgagttattaaaaagaaatggtgcggatgtatatatgacaattttaagtccagac
catatagcaaggaatcctagtgataatgcgactacatttattaatgaaaagaatgaagta
tataatgattataaattaaactcctacaataatagtactgtatggcctgttggaggtcag
tggggtttagaacagagggtgaagataacaaataacatcttatctgtttctaaaaacaag
aagactatttttattagtattcatgcagacaacgatgtagatagggatgtaggaaaatta
gttttatatagcgaaagaaatagtatagaggatcaaaaaagtaaggattttgcaaactac
ttattaccctcacttggggataatgcaacagctgatggtatgactttagctgtattacac
aacaacaatgcagacgtaaaagttctaattgagttaagaaatatggctcatttaaaagag
gctatggcccttttggataataataaaaggcaagaagatgctttaatgatattaaatggt
ataaaaaactataccaaaaagcattaa
DBGET
integrated database retrieval system
