Thiospirochaeta perfilievii: EW093_16850
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Entry
EW093_16850 CDS
T06210
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sper
Thiospirochaeta perfilievii
Brite
KEGG Orthology (KO) [BR:
sper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sper03016
]
EW093_16850 (truB)
Enzymes [BR:
sper01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EW093_16850 (truB)
Transfer RNA biogenesis [BR:
sper03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EW093_16850 (truB)
Prokaryotic type
EW093_16850 (truB)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QEN06286
UniProt:
A0A5C1QIH8
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All DBs
Position
complement(3634906..3635802)
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AA seq
298 aa
AA seq
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MKLLQIMSHDGMILLKKPEGVTSFQALGILKKKLNTKKVGHTGTLDKFATGLLVILTGKM
TKFAPYITGMDKTYLATFTFGTSTTTLDPEGDFIGEKPIPSIDQIKKEINKSFKGTISQI
PPDFSAVHINGSRAYQLKLKGEEVKIPPREITINDFNIINWNGRDLDVEISCSKGTYIRS
LARDLGVNSGSLAYVTKLERTKVGPFSIDDSVTGDLFESRNLVSPYNLITDLGRQVSYIS
DNAAKDIRNGKHMRDSFYLDSGEKFKSGDVALFTKDKNFVAMINVDNGKTSYLFVSNR
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgttacagatcatgagtcatgatggaatgatattactaaagaagcctgaggga
gtaacatcctttcaggctcttggtatattaaaaaaaaagttaaatactaaaaaagttggt
catacaggaactctagataagtttgcaacaggtcttttggttattttaaccggaaaaatg
actaaatttgcaccttatataacaggaatggataagacctatctggccacttttacattt
gggacttctactacaacactggaccctgagggtgattttataggtgagaaacctatcccg
tctatagatcagattaaaaaagagattaataagagttttaaaggaactatttcacaaata
ccaccagacttttctgcagttcatattaatggtagtagagcgtatcaattaaaactaaag
ggtgaggaagtaaaaattccaccaagagagattacaataaacgattttaatataataaat
tggaatggtagagatttagatgtagaaatatcttgttctaagggaacatatattcgatct
ctagctcgtgatcttggagtaaatagtggctcactagcctatgtaactaaattagagaga
acaaaggtaggtccattttccatagatgactctgtaactggagatctatttgaaagtaga
aatttagtaagtccatataatttaattacagatctaggtcgacaggtatcatatatttct
gataatgcagctaaagatataagaaatggaaaacatatgagagactctttttatttagat
agtggagaaaagtttaaatcaggagatgtagcactctttactaaagataaaaattttgta
gctatgattaacgtagataatgggaaaacatcatatctttttgtgagtaatagatga
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