Thiospirochaeta perfilievii: EW093_16945
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Entry
EW093_16945 CDS
T06210
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
sper
Thiospirochaeta perfilievii
Pathway
sper03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EW093_16945 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sper03400
]
EW093_16945 (uvrB)
DNA repair and recombination proteins [BR:
sper03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EW093_16945 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EW093_16945 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_3rd
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
AAA_30
NPHP3_N
LTXXQ
Kinesin
AAA_14
PMT2_N
Motif
Other DBs
NCBI-ProteinID:
QEN06305
UniProt:
A0A5C1QE08
LinkDB
All DBs
Position
complement(3654332..3656320)
Genome browser
AA seq
662 aa
AA seq
DB search
MAKFIVKSPFSPSGDQGPAIKELSEGVLNGEKYLTLKGVTGSGKTFSMAKIIENVQKPTL
IVSHNKTLAAQLYREFKEFFPDNAVEYFVSYYDYYQPEAYVPSKDLFIEKDSSINDEVDR
LRLSTAASLMERKDVIVIATVSCIYGLGNPKAFFDLRLQISKDQPKNIDVYAKQLITLQY
ERNNYTPDRGSFRIKGDVLEIYPAYLKDLAYRIEYDWDDIASIKKIHPLTGDVLDEIDSC
EIYPAKHFVLEEHEVLSALDLIEEEKKRQVEFFESQNKLVEAQRIETRTNYDIDMMREMG
YCSGIENYSRILSGRVIDERPAVLIDYFPKDFLTIIDESHVTVSQIGAMYEGDRSRKNNL
VNYGFRLPSALDNRPLKYPEFDRITPQKIFVSATPTPKEIKLSSRVVEQLIRPTGLLDPI
INVRPTDGQIEDLYKEINIRIKKNERVLITTLTKKMAEDMTEYLCSLDLKVKYLHSDIKT
FERVEILKELREGKFDVLIGINLLREGLDLPEVSLIAIMDADKIGFLRSTTSLIQTIGRA
ARNSEGYVIMYADKMSDAMKVAIKETKRRREIQEEYNKKHGITPTTVKKAIKDILERELD
KRKGAEFENIKVLKDSTNLLDPKQKKRLIKALENEMMEHAKRMEFEEAAVLRDEIVKLRD
SK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatttattgtgaaatccccattctctccttcaggggatcaaggccctgcaatt
aaagaactatcagagggggtattaaatggagagaaatatttaacactaaagggagtaact
ggctcaggtaaaacattctcaatggctaaaataattgaaaatgttcaaaaaccgaccctt
attgtttcccataataaaacattagcagctcaactatatagggagtttaaagagttcttt
cctgataatgcagtagagtattttgtttcatattatgactactaccaaccagaggcttac
gtcccttctaaggatctttttatagagaaggattcatctataaatgatgaggtagataga
ttaaggctctctacagctgcatcgctaatggagagaaaggatgttattgtaattgcaaca
gtctcttgtatatatggtttaggtaaccctaaagctttttttgatctacgattacaaatt
tctaaggatcaacctaaaaatatcgatgtatatgcaaaacaattaataacattacagtat
gaacgtaataattatacccctgataggggatcctttagaataaaaggggatgtcttagag
atatatcctgcataccttaaagatttagcatatagaatcgagtatgactgggatgatatc
gcttctataaagaaaatacatccacttactggggatgttttagatgagattgactcctgt
gagatttaccctgcaaaacactttgtattagaagagcatgaggtcttatcagccctggat
ctaatagaagaagagaaaaaaagacaggttgagttttttgaatcccaaaataaacttgta
gaagcccagagaatagagactagaactaattatgatatagatatgatgagggaaatgggt
tactgttctggtattgaaaactactctagaattctatcaggaagagtaattgatgagaga
ccagcagttttaatagactactttcctaaggactttttaacaataatcgatgagtcccat
gttacagtctcccagataggggctatgtatgagggggataggtcgaggaaaaacaatctt
gtaaattacggctttagactaccttcagccctggataatagacctcttaaatatccagag
tttgatagaattacaccacaaaaaatatttgtttctgcaactccaacacctaaagagata
aaactatcctcaagggtcgtagagcaactaataagacctacaggtcttttagatcctata
ataaatgtaagaccaactgacggtcagatcgaggatctatataaagagataaatatccgt
attaaaaagaatgagagggtattaattactactcttacaaaaaagatggcagaggatatg
acagagtatctctgttccctagatttaaaagtaaaatacctacactccgatattaaaacc
tttgaaagggttgagattttaaaagagctaagagagggtaaatttgatgtgcttataggt
ataaaccttttaagagagggattagatttaccagaagtatcattgattgctattatggat
gctgataaaataggctttttaaggtctactacatctcttattcaaacaattggtcgggct
gctagaaattccgaaggctacgttattatgtatgctgataaaatgtctgatgctatgaag
gttgcaataaaagagactaagagaagaagagagatacaagaagagtacaataagaagcat
ggtataactcctacaactgtaaaaaaagcgattaaggatatccttgaaagagagctagat
aaaagaaagggtgctgagtttgaaaatataaaagtattaaaagatagtacaaaccttcta
gatcctaaacagaaaaagagacttattaaggcgttagaaaatgagatgatggagcatgca
aaaagaatggaattcgaagaagccgctgtattaagagatgagatagttaagctaagggat
agtaagtga
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