Staphylococcus pettenkoferi: CEP67_01065
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Entry
CEP67_01065 CDS
T04943
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
spet
Staphylococcus pettenkoferi
Pathway
spet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEP67_01065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spet03019
]
CEP67_01065
Messenger RNA biogenesis [BR:
spet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CEP67_01065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
vATP-synt_E
Anti-Pycsar_Apyc1
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ASE35946
UniProt:
A0A1Z3TY62
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All DBs
Position
235510..237183
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AA seq
557 aa
AA seq
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MSLIKKKNKNIRIIPLGGVGEIAKNMYIVEVDDEMFMLDAGLMFPEDEMLGVDVVIPDIQ
YVIENKHRLKGIFLTHGHEHAIGAASYVLEQVDAPVYGSRLTLALVKESVKARNINKKIR
YYVVNDESVMRFKSVNVTFFNTTHSIPDSLGVCIHTSYGAIVYTGEFKFDQSLHGHYEPD
LKRMTEIGEEGVFALISDSVEAEKPGYNTPENVIESHMYDAFTKVKGRLIVSCYASNFVR
IQQVLNIASRLNRKVSFLGRSLETSFNIARKMGYFDIPRDLLIPIKEVENYPKNEVIIIA
TGMQGEPVEALNQMALQQHKIMNIEKGDSVFLAITASASMEVIVGNTLNELARAGAEIIP
NNKKIHASSHGCMEELKMMINMMKPEYFIPVNGEFKMQIAHAKLANESGVDPEKIFLVEK
GDVVNYDGKDMILNEKVNSGNVLIDGLGVGDVGNIVLRDRHLLAEDGIFIAVVTLDSRNR
RIAAGPEIQSRGFVYVRESEELLQEAEEKVREIVEQGLQEKRIEWSDIKQNMRDQISKLL
FESTKRRPMIIPVISEI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttaataaagaaaaagaataaaaatattcgcatcattcccctcggcggtgtgggt
gaaattgcgaagaatatgtatatcgttgaagtagacgatgaaatgtttatgttggatgcc
ggcctcatgttccctgaagacgaaatgcttggggtcgatgttgttattcctgacatccaa
tatgtgattgagaataaacaccgcttaaagggaatcttcctcacacatggacatgaacac
gcaattggcgctgcttcttacgtcttagagcaagtcgatgcgcctgtttatggttcacgt
ctgactttagcgttagtgaaagaaagcgtgaaagcacgtaatattaataagaagattcgc
tattatgtcgttaatgatgaatcagtgatgcgtttcaagagtgtcaacgtaacgttcttt
aacacgacacatagtattccagatagcttaggcgtatgtattcatacttcatacggcgct
atcgtctacacaggtgaatttaaattcgaccaaagtttacatggtcattacgaaccagat
cttaaacgtatgacagaaattggtgaagagggtgtctttgcactcatcagtgattctgta
gaggcagagaagcctggatataatacacctgagaacgtgattgaaagccatatgtatgat
gcttttacgaaagtgaaaggacgtcttatcgtctcttgctacgcctcaaacttcgtgcgt
atccaacaagtgttaaacatcgctagtcgtttaaatcgtaaagtgtcattcttgggacgt
tcacttgaaacgtcattcaacattgcgcgtaaaatgggttatttcgatataccacgtgat
ttactcattccgattaaagaagttgagaactatcctaagaacgaagtcattattattgcg
acaggcatgcaaggtgaacctgttgaagctttaaatcaaatggcacttcaacaacacaag
attatgaatatcgagaaaggcgattctgtcttcttagccatcacagcgtcagcaagcatg
gaagtcatcgtcggtaacacattaaacgaacttgcgcgtgcaggtgcagaaatcattcct
aataacaagaagattcacgcttctagtcacggttgcatggaagagctcaagatgatgatt
aacatgatgaaacctgaatacttcattccggttaacggtgagtttaaaatgcaaattgcg
cacgcgaaattagcgaatgaatcaggtgttgaccctgagaagatcttcctagttgagaaa
ggggacgtcgtcaattacgacggtaaagatatgatactcaacgaaaaagtcaactcaggt
aatgtgcttatcgatggtttaggcgttggtgacgtcggcaatatcgttctgcgtgataga
catctattagctgaagatggtatctttatcgctgttgtgacgttggattcacgcaacaga
cgtattgctgcgggacctgaaattcaatcacgtggtttcgtctatgtgagagaaagcgaa
gaattgcttcaagaagcagaagaaaaagtgcgtgaaattgtagaacaaggtttacaagag
aaacgtattgaatggtcagatatcaagcagaatatgcgcgaccaaattagtaaattatta
tttgaaagtacgaaacgccgaccaatgatcatcccagttatttctgaaatataa
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