Staphylococcus pettenkoferi: CEP67_01115
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Entry
CEP67_01115 CDS
T04943
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
spet
Staphylococcus pettenkoferi
Pathway
spet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEP67_01115 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spet03019
]
CEP67_01115 (rny)
Messenger RNA biogenesis [BR:
spet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CEP67_01115 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
VTT_dom
Motif
Other DBs
NCBI-ProteinID:
ASE35956
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All DBs
Position
248479..250038
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AA seq
519 aa
AA seq
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MYLLTLLLILIGIILGVVVGYIIARNLLHQKQIQAKQTAEDIINQANKEAENIKKEKLLE
AKEENQIFKDQVESELRERCGDLQKQETRLLQKEENLERKSDLLEKKDEILEQKESELEE
KQQQVDAKESSVQTLINKHEQELERISGLTQEEAANEQLQRVEDELSHDIAILVKEKERE
AKETVDKQAKELLATTAQRIAAEHTSESTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRREIARIALVNLVSDGRIHPGRIEEMVEKSRNEVDDIIRD
AGEQATFEINVHNMHPDLVKILGRLQYRTSYGQNVLKHSIEVAHLAGMLAAELGEDITIA
KRAGLLHDVGKAIDHEVEGSHVEIGVELAKKYGEGDTVINAIHSHHGDVEPTSIISILVA
AADALSAARPGARKETLENYIRRLERLETLSESYDGVEKAFAIQAGREIRVIVAPDAIDD
LKSHRLARDIKKQIEDELQYPGHIKVTVVRETRAIEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgtatttattaaccctcctactcattttaataggcattattctgggagttgttgtgggg
tatatcatcgcccgtaatttgttacatcagaagcagattcaagcgaaacaaactgctgaa
gatattatcaaccaagctaacaaagaagctgagaacattaagaaagaaaagctccttgaa
gcaaaagaagaaaatcaaatatttaaagaccaagttgaaagcgaacttcgcgaacggtgt
ggtgatttacaaaaacaagaaacccgacttcttcaaaaagaagaaaacttggagcgaaaa
tctgatctcttagagaaaaaggatgagattttagagcaaaaagaatctgaacttgaagaa
aaacaacaacaagtagatgcaaaagagagtagtgttcaaacattaataaataagcatgaa
caagaattagaacgcatctctggtctcactcaagaagaagcagcgaacgaacaactccaa
cgagtagaagatgaattgtcacatgatattgcaatacttgttaaggaaaaagaacgagaa
gcgaaagaaacagtagataagcaagcgaaagagttgttagcgacaacagctcaaagaatt
gccgcagaacacacatctgaatccacagtttcagtagttaatcttccaaacgatgagatg
aaaggacgtattatcggtcgagaaggtcgtaatattcgtacgttagaaacgttaacaggt
atcgatttaatcattgatgatacacctgaagcagtcatactttcaggtttcgatcctatt
cgacgtgaaattgcacgaatcgcgcttgtgaacttagtttcagatggacgcatccatcct
ggacgcatcgaagaaatggtcgagaaatcacgtaatgaagtggatgacatcattcgcgat
gctggtgaacaagcgacattcgaaatcaatgtacacaatatgcatcctgatctcgttaag
atactcggccgtttacaatatcgtacaagctacggtcagaacgtgcttaaacactctatc
gaagtggcacatctcgctggaatgctagccgcggaacttggagaagatattacaatcgct
aaacgcgcaggacttcttcacgatgtcggtaaagctattgaccacgaggtcgaaggtagt
cacgtagaaattggtgtagaactcgctaagaaatacggcgagggtgatacagtcatcaat
gcaattcactcacaccatggtgatgttgaaccaacttcaattatttcaatcctcgttgca
gcagcagatgctttatcagcagcacgacctggtgcgcgtaaagaaacattagagaattat
atcagacgtttagaacgattagaaacgctttcagaaagttatgatggtgtagaaaaagcc
tttgctatccaagctggtagagaaattcgtgtcatcgttgcacctgatgcgatcgatgac
ttgaaatcacatcgcttagcaagagatattaagaaacaaatagaggatgaattacaatat
cctggtcatataaaagtgacagttgttcgtgagactagagcaattgaatatgcaaaataa
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