Staphylococcus pettenkoferi: CEP67_01945
Help
Entry
CEP67_01945 CDS
T04943
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
spet
Staphylococcus pettenkoferi
Pathway
spet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEP67_01945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spet03019
]
CEP67_01945
03400 DNA repair and recombination proteins [BR:
spet03400
]
CEP67_01945
Enzymes [BR:
spet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CEP67_01945
Messenger RNA biogenesis [BR:
spet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CEP67_01945
DNA repair and recombination proteins [BR:
spet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CEP67_01945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
SNF2-rel_dom
DAGK_cat
Motif
Other DBs
NCBI-ProteinID:
ASE36113
LinkDB
All DBs
Position
complement(429539..430918)
Genome browser
AA seq
459 aa
AA seq
DB search
MLKQALKAYFGFEQFKPGQAEVIQSILNGQHTLGILPTGSGKSLCYQLPTYIKQQPTLII
SPLISLMDDQVMQLKAQGESRVCYIHSGMNESERYQNIKMLPHSRFIFLSPEFILQSHRM
KLLKNIHFGLIVLDEAHCLSEWGYDFRPHYALIGQLTDRYPQTPILALTATAPPSLEKDL
EHILNRQFKVVKTTMNRDNISFTHFNFQDEQQKIDWLLEFIEHSGPTIIYVSSKKMCLQL
ARAIYQEGYLTGIYHGDLSYQERQTVQDQFIQNHIPIIVATSAFGMGVNKPDIRTVIHFH
LSPSPSSYLQEIGRAGRDGQPSQAISLFQPDDAFLLETILFSDAILEEDIQLHQRGQLLD
DFKSNIIETLLMRYQYDEINEIFNTASKRKQFGYQKMMQYKHLTSCRRAFLLNYFSETLT
QRPSICCDNDTNFEFLSILNRKKVKRRMTYVEKLNNLFE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgttaaagcaagcacttaaagcctatttcggctttgaacaatttaagccaggtcaagct
gaggtgattcagtctattctcaacggccagcatacgctaggcatcttgcccacaggtagt
ggtaaaagtctatgttatcaactacctacgtatattaagcaacagcctaccttgattatt
tcgcccttaatttcactcatggatgatcaagtgatgcaactgaaagcgcaaggtgaatca
cgtgtatgctacattcactctggtatgaatgaatctgaacgataccagaatataaagatg
ttaccgcatagtcgctttatctttctaagtccggaatttattctgcaatctcatcgaatg
aagttattgaaaaatattcatttcggcctaattgttctggatgaagcacattgtttatca
gaatggggttatgatttcagaccgcactatgccttgataggtcagcttactgatcgctat
ccgcaaacgcctatactcgctttaacagcaacagcgccgccaagtttagagaaggatctc
gaacacattcttaaccgtcaattcaaagttgttaagacaacgatgaaccgtgacaacatt
agttttacgcattttaactttcaagatgaacaacagaagattgactggctacttgagttt
atcgaacattcagggccgacgattatttatgtctcgagcaagaagatgtgtttgcaactc
gctcgtgcgatttatcaagaagggtacttaacaggcatctatcacggcgatttgagttat
caggaacgtcaaaccgttcaagatcaatttattcagaatcatattcctattatcgttgca
actagtgctttcggtatgggcgtcaataaaccagatattcgtacagttatccatttccat
ctctcaccgagcccatccagttatctacaagagattggtcgggcaggacgagatggtcag
ccgagccaagcgatcagtttatttcaacctgatgatgcgtttcttcttgagacaattctg
tttagtgatgcgattcttgaagaagatattcagcttcatcagcgaggccaacttctcgat
gattttaaaagtaacattatcgagactttactaatgcgctatcaatatgatgaaatcaac
gagatttttaataccgcttcaaagcgtaaacaattcggttatcaaaaaatgatgcagtat
aagcatttaacgtcgtgtcgacgcgcctttttactcaattatttttccgaaacgcttact
caacgtccaagtatttgctgtgacaatgacacgaactttgaatttttatccattcttaat
cgtaaaaaggtaaaaagacgaatgacatatgttgaaaaactaaataatttatttgaataa
DBGET
integrated database retrieval system
