Staphylococcus pettenkoferi: CEP67_02565
Help
Entry
CEP67_02565 CDS
T04943
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
spet
Staphylococcus pettenkoferi
Pathway
spet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CEP67_02565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spet03400
]
CEP67_02565
Enzymes [BR:
spet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CEP67_02565
DNA repair and recombination proteins [BR:
spet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CEP67_02565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
AAA_12
AAA_22
nSTAND3
UvrD_C
AAA_14
AAA_18
Zeta_toxin
Mg_chelatase
TsaE
Rad17
SLFN-g3_helicase
AAA
DUF815
AAA_28
NPHP3_N
AAA_16
UvrD-helicase
T2SSE
RsgA_GTPase
NACHT
AAA_29
AAA_17
ABC_tran
DEAD
5_3_exonuc
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ASE36231
LinkDB
All DBs
Position
complement(547040..549502)
Genome browser
AA seq
820 aa
AA seq
DB search
MADDTLFNYSMLKGTIDAILFQNKDNFYTVLKVETIETNEDLDDLATVVGFFPDIVEGDV
YTFKGQVVSHPKYGKQLKADTFEKELPQTKEAIVSYLSSELFKGVGKKTAQNIVNTLGET
AITDILDDASVLDKVSGLSKKKRKQIAEQIQANQETERIIVRLHDLGFGPKLAMTIYQTY
LDETLTIIEKEPYRLVYDVKGIGFNKADTLARKMGIAYDDDERLKAGILYVLEESCIKQG
HTYLPKTRVYDEAIDMLTDTQEAEITSDHISKMVQELVEENKMIQQEEELAVPSLYYSEL
KSSQNLYRNYTYTQKLEHFEQSDLQMHIGEIEERQGVSYAKSQKEALETAINSKVMLLTG
GPGTGKTTVIKGIVELYAEIHDLSLDYDDYQEDDYPIVLAAPTGRASKRLAEATQLEAMT
IHRLIGWNQDTQPEDILDNEINASLIIIDEMSMVDTWLFHQFMDAVPLDAQIIFVGDEDQ
LPSVGPGQVFKDLIDSQAIPRVNLTEVYRQQDGSSIIELAHRIKLGQQIDITQKFHDRNF
IQCGTDQIPNIVEKVAQSAVRKGYDMSDIQVLAPMYKGSAGIRRLNAVLQDILNPKSEDK
REITFGDVSFRKGDKVLQLVNRPNDNIFNGDIGVIVGVFWAKENELDKDIIIVDFEGNEI
IFTKQDFLELTHAYCTSIHKSQGSEFPIVIMPMVKQYYRMLQRPILYTGLTRAKQSLVLL
GDPEAFHIGLTTQGQTRLTQLRHIVQSYFNITTETDESKSIALDQVSQTASESAAADSTK
QEAEPSQKDSSSVVLTEETIYQIDPMINMGQVTPYDFVKQ
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgatactttatttaactattcgatgcttaaaggcacgattgacgcaatctta
tttcagaataaggacaatttctatacggtattgaaagtggaaacgattgagacgaatgaa
gatttagatgatctcgctactgtcgtcggcttcttcccggatatcgttgagggtgatgtt
tatacctttaagggacaagtcgtctctcatccgaagtatggtaagcaactcaaagcagat
acctttgagaaagagttgccacaaacgaaagaggccatcgtgagctatctttctagtgaa
ttgtttaaaggtgtaggtaaaaagaccgcacagaatatcgttaatacattaggtgaaaca
gccattactgacattcttgacgatgcttcagtcctagataaggtttcgggcttatctaag
aagaaacgcaaacaaattgctgaacaaattcaagctaatcaagaaacagaacgtattatc
gtgcgcttacatgatttaggctttggacctaaacttgctatgacgatttatcaaacttac
ttagatgaaacattaacaatcatagagaaagaaccctatcgtctggtatatgacgttaaa
gggattggttttaacaaagctgacacactcgcacgtaagatgggtatcgcttatgacgat
gatgagcgtctcaaagcaggaattctctacgtgctggaggaatcttgtatcaagcaaggt
catacatacttgcctaagacaagggtttacgacgaagcgatagatatgttgactgatact
caagaagccgaaattacttccgaccacattagtaaaatggttcaagaactcgttgaagaa
aataaaatgattcaacaagaagaggaattagctgtaccgagcttatactattctgagctt
aaaagtagccaaaacctttaccgaaattacacttatacgcaaaagctcgaacactttgaa
caatcggatttacaaatgcacattggtgaaattgaagaacgccaaggcgtgagttatgcg
aaatctcaaaaggaagcgctagaaacagcaatcaattctaaagtcatgttactcactggt
ggaccaggtacaggtaagacgacagttatcaaaggaatagtggagctctatgcagagatt
catgatctgtcattagactatgatgactatcaagaagatgattatcctatcgttctagct
gcgccaacaggtcgagcatcgaaacgccttgctgaagcaacgcaacttgaagcgatgacg
attcaccgcttgataggatggaatcaagatacacagcctgaagacattctagataatgag
atcaatgcgagcttaatcatcattgatgaaatgtcgatggtggatacttggttattccat
cagtttatggatgctgtgccactcgatgcgcaaatcattttcgtaggtgatgaagatcag
cttccgtcagtaggacctggccaagtatttaaagatcttatagattctcaagcaatacct
cgcgtgaatctaacagaggtttaccgtcaacaagatggctcaagtatcattgagttggcg
caccgtatcaaattaggtcaacaaatcgatataacgcagaagtttcatgaccgtaatttt
atccaatgtggtacggatcaaattccaaatatcgttgagaaagtcgcgcaaagtgctgta
cgtaaaggttatgatatgagcgatattcaagtgctcgcaccgatgtataaaggctcagca
gggattcgtagattaaatgctgtgctacaagacattcttaatccgaaatctgaagataaa
cgtgaaatcacgttcggggacgttagtttccgtaaaggagataaggtcttgcagttagtc
aatcgacctaacgataatatcttcaatggtgatatcggagtcatcgttggtgtcttctgg
gcgaaagagaacgaactcgataaagacattatcatcgtcgattttgaaggtaacgaaatt
atctttacaaagcaagatttcttagagcttacacacgcgtactgtacttcgattcataaa
tcgcaaggctctgagtttcctatcgtcatcatgcctatggtgaaacaatattatcgcatg
ttacaacgtccaatactttatacaggacttacacgtgcgaaacaatctcttgtgctatta
ggagaccctgaagctttccatattggattgactactcaaggacaaacacggttgacccaa
ctgcgccacatcgtgcaatcatactttaatatcactacagaaacggatgagagcaaatca
atcgctctagatcaagtatcacaaacagcgtcagaaagtgcagcagctgattccacgaaa
caagaggctgaaccttctcagaaagactcatcatctgtcgtacttaccgaagaaacgatc
tatcaaattgatccgatgattaacatgggccaagtcacaccttacgatttcgtgaaacag
tga
DBGET
integrated database retrieval system
