Staphylococcus pettenkoferi: CEP67_03920
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Entry
CEP67_03920 CDS
T04943
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
spet
Staphylococcus pettenkoferi
Brite
KEGG Orthology (KO) [BR:
spet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spet03009
]
CEP67_03920
Enzymes [BR:
spet01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CEP67_03920
Ribosome biogenesis [BR:
spet03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CEP67_03920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Cons_hypoth95
Methyltransf_15
TRAM
MTS
TRM5-TYW2_MTfase
PrmA
Methyltransf_11
Methyltransf_12
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
ASE36460
LinkDB
All DBs
Position
complement(817497..818861)
Genome browser
AA seq
454 aa
AA seq
DB search
MIDIKKNDIKTGTVQDLTHEGHGVVKIDRYPIFVPYALIDEEIEYKIIKVKKNFAIGKLQ
QVHIASESRVEPPCVYYHKCGGCQLQHMDYPAQLAMKKEQVVNLFHRKGDFADTLIRDVI
GMEDPWYYRNKSQLPVGRNKDGHVKMGFFRQRSHDIIDMEECLIQHPSQNEIMVALKQWF
DELGVSVYNERSKRGLMRHVVIRSGYYTDQLMVIFVTNGKKFKQRDTLVQRLVSQFPQIT
SIKQNINTSHSNVIMGKKSILLFGAEQIDDRLSDVEFKISDQSFYQINASQTEKLYQKAL
DYADLQGEEVVLDTYCGIGTIGLYMAPKAKHVYGVEVIPDAIEDARLNATRNGFNNTTFV
PGKAEEVILKWKEQGIRPDVVMVDPPRKGCDERFIQTLRELQPKKIIYISCNPATQQRDV
TQLKDLYDLVEITPVDMFPQTTHVETVAQLVRQS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgatagatattaagaaaaatgatataaaaacaggtacggtacaagatttgacgcatgaa
ggtcatggtgtagtgaagattgatcgctatcctatcttcgtgccctacgcgctcatcgat
gaagaaattgaatacaagattattaaggtcaagaagaactttgcgatagggaagttacag
caagtgcacattgcgagtgagtcacgtgtggaaccgccttgcgtgtactatcacaagtgt
ggcgggtgccaactccaacatatggattatccagcgcaacttgctatgaagaaagagcaa
gtcgttaacttgttccatcgtaaaggagactttgcggatacacttatccgagatgtcatc
ggtatggaagacccttggtattatcgcaataaatctcaattaccagtagggcgaaacaaa
gatggacatgttaagatgggtttctttagacaacgtagccacgatatcattgatatggaa
gaatgcttgattcagcacccttcacagaatgagattatggtagcattgaaacaatggttc
gatgagcttggtgtaagcgtatataatgaacgaagtaagcgtggtctcatgcgtcatgtg
gtgattcgaagcgggtattatacagatcaactcatggtgatcttcgtgacgaatggtaaa
aagtttaaacaacgcgacacgctcgttcaacgcttggtctctcaatttcctcaaatcacg
agtatcaaacagaatattaatacgtctcattccaacgtgattatgggtaagaaatcgata
ttattatttggcgcagaacaaatcgatgaccgtttatcggatgtagaatttaaaattagt
gatcaatccttttatcaaatcaacgcttcccaaacggaaaaactatatcaaaaagcgctt
gattatgctgatttacaaggtgaagaagtcgtgctagatacgtattgcggtatcggaacg
attggtctctatatggcgcctaaagctaaacatgtgtatggtgtagaagtgatacctgat
gctatcgaggatgcccgacttaatgcgactcgaaatggattcaacaatacgacttttgtc
cctggtaaagcggaagaagttattctaaaatggaaagagcaaggtattcgtcctgatgta
gtcatggtggatccgccgcgtaaaggttgtgatgagcgctttattcaaacgctgcgtgaa
cttcaacctaagaagattatttatatttcttgtaatccggcgacacaacaacgtgatgtg
acgcaactcaaggacttatatgatctcgtagaaattacgccagtagatatgtttccacaa
acgacacatgttgagacggtagcacaattggtgcgtcaatcttag
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