Streptomyces peucetius subsp. caesius: CGZ69_03600
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Entry
CGZ69_03600 CDS
T07792
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
speu
Streptomyces peucetius subsp. caesius
Pathway
speu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
speu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CGZ69_03600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
speu03400
]
CGZ69_03600
Enzymes [BR:
speu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CGZ69_03600
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CGZ69_03600
DNA repair and recombination proteins [BR:
speu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CGZ69_03600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ATW52416
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All DBs
Position
778660..779448
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AA seq
262 aa
AA seq
DB search
MPELPDVEGFREVLASCAQGKRIERVEVGDTGVLHGVSPERLRRALEGRRFTEPERHGKW
LLARTDGPTVLLHFGMTGQLVCCRATDPPHPHDRVVFTVGRRELRYRDQRKLRGLWLADD
ADADVARILHDQGPDAMSVDRAEFDRLLARRHGRVKPALTDQSLLAGLGNLLADEILWRA
RLHPTRRADRLDEDERRRLHTEMRRTLRSSVRAGRVPPRRTWLTGRRDDSDPRCPRCDGP
LKRERVGGRGTVFCPRCQPDGR
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctgcccgatgtcgagggattccgggaggtcctggcctcctgcgcgcagggc
aaacggatcgaacgggtcgaggtcggcgacacgggcgtgctgcacggggtgagcccggag
cggctgcgccgagctctggaggggcgtcggttcacggagccggaacggcacgggaaatgg
ctgctcgcccgcacggacgggccgaccgtactgctgcacttcggcatgaccggacaactg
gtctgctgccgtgcgacggacccgccgcatccgcacgaccgcgtcgtcttcaccgtcggc
cgccgggaactccgctaccgcgaccagcgcaagctgcgcggcctgtggctcgccgacgac
gccgacgcggacgtcgcgcggatcctccacgaccaggggccggacgcgatgtcggtggac
cgggccgagttcgacaggctgctcgcccgccggcacggccgggtcaaacccgccctgacc
gaccagtcgttgctcgccgggctgggcaatctgctggccgacgagatcctgtggcgcgcc
cgcctgcatccgacgcgccgggccgaccggctggacgaggacgagcgccgtcggctgcac
accgagatgcgccggaccctgcgctcgtcggtacgtgccgggcgcgttccaccaaggagg
acttggctcaccggccgacgtgacgactccgacccgaggtgcccgcgctgcgacgggccg
ctcaagcgcgagcgtgtcggcgggcgcggcacggtgttctgcccccggtgccagccggac
ggccggtga
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