Streptomyces peucetius subsp. caesius: CGZ69_11820
Help
Entry
CGZ69_11820 CDS
T07792
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
speu
Streptomyces peucetius subsp. caesius
Pathway
speu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
speu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGZ69_11820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
speu03019
]
CGZ69_11820
03009 Ribosome biogenesis [BR:
speu03009
]
CGZ69_11820
Enzymes [BR:
speu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CGZ69_11820
Messenger RNA biogenesis [BR:
speu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CGZ69_11820
Ribosome biogenesis [BR:
speu03009
]
Prokaryotic type
rRNA processing factors
CGZ69_11820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
ATW48508
LinkDB
All DBs
Position
complement(2591934..2596196)
Genome browser
AA seq
1420 aa
AA seq
DB search
MLEQTESGTAGNNNEDHNNSPSDTLPPRRRRRAASRPAGAPQTAEAAEGAAEVQAAEAVI
PAVAAVGAVVEGSDEAVEEAPAEPAAAEAAQVAQAVTDAPRARRRATRKATAPAGSPQVA
EAVESDAVATGASDEAAEPVAAEAPAPRRRRASAPAGAPAGGVSAEAEAAEEPEAAAPRT
RRRATRKATAPAGSPQAAEAVESDGVATGGVSDEAAEPVAADAPAPRRRRATRKATAPAG
APSTMEPLTDEAARTESAAAADAAPEEAPEPAPAESAAPRRTRRRASAPAGAPKAVEAGV
TEAAVTEAAVTEADEEEAVVAAVVEEPEAESAEEAPARRRTRRRASAPAGAPRTETAEDA
RPVEAESVEADEEAAPAPRTRRRAARKAAVAAVAPEAGDEDMADAGESLPESAVAQIASE
EVEVAAAEKAATRGRTRRRAVSPQFTSQPVEQAEETPARGGRGARPAVPTFQAPVFAEPM
FQTPETAAAAAAASHPEPQEEEETAEAAAPEQTGRRRRRRRGEPVEPVEPVEAPVAEAAP
AEDETETEQAEPEQAEAAEGEELDEYEDRPSRRRRRGGRRRRRGEAAEADEAAEEQAEEA
GDEDEVAHDEGEEDEEAETETPSAAGTSSSRRRRRRRRRSGDAAEGEAIADDPERTVVKV
REPRKKEEPSDEVQSIKGSTRLEAKKQRRREGREQGRRRVPIITEAEFLARREAVERVMV
VRQSGERTQIGVLEDNVLVEHYVNKEQATSYVGNVYLGKVQNVLPSMEAAFVDIGKGRNA
VLYAGEVNFEALGMAGGPRRIEAALKSGQSVLVQVTKDPIGHKGARLTSQVSLPGRYLVY
VPEGSMTGISRKLPDTERARLKTILKKIVPEDAGVIVRTAAEGASEDELRRDVERLQAQW
EDIQKKAKSGNAPTLLYGEPDMTVRVVRDIFNEDFSKVVVSGDEAWETIHGYVSHVAPDL
ADRLQRWTSETDVFAVHRIDEQLMKALDRKVWLPSGGSLVIDKTEAMIVVDVNTGKFTGQ
GGNLEETVTRNNLEAAEEIVRQLRLRDLGGIVVVDFIDMVLESNRDLVMRRLLECLGRDR
TKHQVAEVTSLGLVQMTRKRVGQGLLESFSETCVHCNGRGVIVHMEQPSSVGGGGKRSKK
RGRGGAQEQAEPQQEAIETETEAEVAAEVAVPVALAEPEFVRDEELYSSVAEAEAAASRG
RGRRRATRKVSAPAGAPTAAESPAAEVQAAAPAPVEPVAEPEPAAPTEEAAPTGRTRRRA
TRKVSAPAGPPVTSEPTVVETTVKAPAEPQPEPAEAAPAPAAEEAPVAAPPRARRRVTRK
VTAPAGSPSGAEEAAVVVVAAEPKAAEPEAEAPKADETEAPAPAAKKAARKTAKKATAKK
AAAKKTAAKKTTAKKTTAKNASKKAVAAEQRRLRASRRVR
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgctcgagcagaccgaatccggcactgccggtaacaacaacgaagaccacaacaacagc
cccagcgacacactgccgccgcgccgcaggcgccgcgccgcgtcgcgtccggcgggtgct
ccgcagacggccgaggccgcagaaggggctgccgaggtgcaggccgccgaggccgtgatc
ccggccgtggccgcagtgggcgccgtggtggaaggctccgacgaggctgtcgaagaggcg
cccgcggagccggcggcggccgaggctgcccaggtggcacaggccgtgaccgacgcgccg
cgtgcgcgtcgccgcgccacgcgcaaggcgacggctccggccggttcgccgcaggtggcg
gaggctgtggagtcggatgccgtagccactggtgcgtccgacgaggctgccgagcccgtt
gcggctgaagcgcctgcgccgcggcgtcgtcgtgcgtccgctcctgccggtgcgccggcc
ggcggcgtctcggccgaggccgaagcagcggaggagccggaggcggccgcgccgcgtaca
cgtcgtcgtgcgacccgtaaggcgacggctccggccggttcgccgcaggcggcggaggct
gtggagtcggatggcgtagccactggtggtgtgtccgacgaggctgctgagccggttgcg
gctgatgcgcctgcgccgcggcgtcgtcgtgcgacccgtaaggccaccgctccggccggc
gcgccgagcaccatggagcccctgaccgacgaggccgcacggacggagtccgctgccgcg
gccgacgcggcccccgaagaggctcccgagcccgccccggcggagagtgccgccccccgc
cgcacccgtcgccgcgcttccgcgccggccggtgcgccgaaggccgtcgaggccggcgtc
accgaggccgccgtcaccgaggccgccgtcaccgaggccgacgaggaggaggccgtcgtg
gccgccgtcgtcgaggaacccgaggccgagtcggccgaggaggcgcccgcgcgccgccgt
acgcgccgccgcgcttccgcacccgccggtgccccccggaccgagaccgccgaggacgcc
cggccggtcgaggccgagtccgtcgaggccgacgaggaggcggcgcctgcgccgcgcacc
cgtcgccgggccgcacgcaaggccgctgtcgccgccgtcgcccctgaggcgggcgacgag
gacatggcggacgcgggcgagagcctgccggagagcgccgtcgcccagatcgcctccgag
gaggtggaggtagcggctgcggagaaggccgcgacccgcggccgtacgcgccgccgtgcg
gtgtcgccccagttcacgtcgcagcctgtagagcaggccgaggagacgcccgcccgtggc
ggtcgtggcgcgcggccggccgtgcccaccttccaggcgccggtcttcgccgagccgatg
ttccagactccggagacggccgccgctgccgctgccgcgagccacccggagccgcaggag
gaagaggagacggccgaggccgctgcccccgagcagacgggccgccgtcgccgccgccgt
cgtggtgagcccgtggagcccgtggagcccgtcgaggcgccggtcgccgaggccgccccg
gccgaggacgagacggagaccgagcaggcggagcccgagcaggcggaggccgcggagggc
gaggagctggacgagtacgaggaccgtccgtcgcgccgtcgccgtcgcggaggccgccgc
cgtcgccgtggtgaggccgcagaggcggacgaggccgcggaggagcaggcagaggaagcc
ggcgacgaggacgaggtcgcccacgacgagggcgaggaagacgaagaggccgagacggag
actccgtcggcggccggcaccagcagcagccgtcgccgtcgtcgtcgccgccgtcgcagc
ggtgacgccgccgagggcgaggcgatcgccgacgacccggagcgtacggtcgtcaaggtc
cgcgagccccgcaagaaggaggagcccagcgacgaggtccagtccatcaagggctcgacc
cgtctggaggcgaagaagcagcgccgccgcgagggccgcgagcagggccgccgccgggtg
ccgatcatcaccgaggcggagttcctggcgcgccgcgaggccgtcgagcgcgtcatggtc
gtccgccagagcggcgagcgcacccagatcggcgtcctcgaggacaacgtgctcgtcgag
cactacgtcaacaaggagcaggccaccagctacgtcggcaacgtctacctgggcaaggtc
cagaacgtcctgccgtccatggaggccgcgttcgtcgacatcggcaagggccgcaacgcg
gtcctgtacgccggtgaggtgaacttcgaggcactgggcatggcgggcggcccccgccgt
atcgaggccgccctcaagtccggccagtcggtactggtccaggtgaccaaggacccgatc
ggccacaagggcgcccgcctcaccagccaggtgtccctgcccggccgctacctggtctac
gtgcccgagggttcgatgaccggcatcagccgcaagctgcccgacaccgagcgcgcccga
ctgaagaccatcctcaagaagatcgtccccgaggacgccggtgtcatcgtgcgcaccgcc
gccgagggcgcgagcgaggacgagctgcgccgcgacgtcgagcgtctgcaggcgcagtgg
gaggacatccagaagaaggcgaagagcggcaacgcgccgacgctgctctacggcgagccg
gacatgaccgtccgtgtcgtccgcgacatcttcaacgaggacttctccaaggtcgtcgtc
agcggtgacgaggcttgggagaccatccacggctacgtctcgcacgtggcgcccgatctc
gcggaccggctgcagcgctggaccagcgagaccgacgtcttcgcggtccaccggatcgac
gagcagctgatgaaggcgctggaccgcaaggtctggctgccgagcggtggctcgctggtg
atcgacaagaccgaggccatgatcgtggtcgacgtcaacaccggtaagttcaccggccag
ggcggcaacctcgaggagaccgtcaccaggaacaacctggaggcggccgaggagatcgtg
cgccagctgcggctgcgcgacctcggcggcatcgtcgtcgtcgacttcatcgacatggtg
ctggagtccaaccgggacctggtcatgcggcggctgctggagtgcctgggccgggaccgg
accaagcaccaggtcgccgaggtgacgtcgctgggtctggtccagatgacccgcaagcgc
gtcggccagggcctgctggagtccttctccgagacctgtgtccactgcaacggccgtggc
gtgatcgtgcacatggagcagccttcgtccgtcggcggtggcggcaagcgctcgaagaag
cgcggccgtggcggcgctcaggagcaggcggagccgcagcaggaggccatcgagaccgag
accgaggcggaggttgccgccgaggtggcggtgcccgtggcgctcgcggagcccgagttc
gtacgggacgaggagctgtacagcagcgtggcggaggcggaggcggccgcctcgcgcgga
cgcggacgtcgccgggccacccgcaaggtgtcggccccggccggcgcgccgacggccgcg
gagtccccggccgccgaggtgcaggccgcggctcccgcgcccgtcgagccggttgccgag
ccagagccggccgcgccgacggaggaggcggcccccacgggccgtacccgccgcagggcg
acgcggaaggtgtccgctccggcgggcccgcccgtgacgtccgagccgaccgtcgtggag
acgaccgtcaaggcgccggccgagccgcagcccgagccggcggaggcggcccccgccccc
gccgccgaggaggcaccggtcgcggccccgccgcgtgcgcgccgccgggtgacccgcaag
gtgacggctcccgccggttcgccgtcgggcgccgaggaggccgcggtcgtcgtggtcgcc
gccgagcccaaggccgcggaaccggaggccgaggccccgaaggccgacgagaccgaggct
ccggccccggcggccaagaaggcggcccgcaagaccgccaagaaggccaccgcgaagaag
gcggcggccaagaagaccgcggccaagaagacgactgcgaagaagacgacggcgaagaac
gcctccaagaaggccgtggccgccgagcagcgtcggctccgggcgtctcgtcgagtacgg
taa
DBGET
integrated database retrieval system
