Streptomyces peucetius subsp. caesius: CGZ69_21015
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Entry
CGZ69_21015 CDS
T07792
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
speu
Streptomyces peucetius subsp. caesius
Pathway
speu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
speu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CGZ69_21015 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
speu03021
]
CGZ69_21015 (rpoB)
03400 DNA repair and recombination proteins [BR:
speu03400
]
CGZ69_21015 (rpoB)
Enzymes [BR:
speu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CGZ69_21015 (rpoB)
Transcription machinery [BR:
speu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CGZ69_21015 (rpoB)
DNA repair and recombination proteins [BR:
speu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CGZ69_21015 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
ATW49999
LinkDB
All DBs
Position
4575145..4578630
Genome browser
AA seq
1161 aa
AA seq
DB search
MAASRNASTANTNNGASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNAAWKARVEA
ALESGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKERDFTYAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVSQLVRSPGVYFDSSID
KTSDKDIFTAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILEEF
GEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVG
RYKVNKKLGADEPLDAGVLTTDDVIATIKYLVKLHAGETETVGESGTQIVVETDDIDHFG
NRRLRNVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRVNAFGFVETPYRKVTDGQVTDEVDYLTADEEDRFVIAQANATLNDELRF
TEARVLVRRRGGEVDYVPPAEVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQ
AVPLIKAEAPLVGTGMEYRCATDAGDVIKAEKDGVIQEVSADYVTVANDDGTYTTYRIAK
FSRSNQGTSVNQKVIVSEGDRVIEGQVLADGPATENGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGA
EVVAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGETGKVIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPIEDMPFLEDGTPVD
IILNPLGVPSRMNPGQVLEIHLGWLASRGWDVSGLADEWAERLQAIGADNVAPGTNVATP
VFDGAREDELAGLLQHTIPNRDGERMVLPTGKARLFDGRSGEPFPDPISVGYMYILKLHH
LVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
VTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVF
RAAEELGIDLSRREPSSVEEV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcaacgcctcgaccgcgaatacgaacaacggcgccagcactgccccg
ctgcgcatctcctttgcaaagatcaaggagcccctcgaggttccgaacctcctcgcgctg
cagaccgagagctttgactggctgctcggcaatgccgcatggaaggctcgtgtcgaggcg
gctctcgaaagcggacaggacgtccccacgaagtccggtctggaggagatcttcgaggag
atctccccgatcgaggacttctccgggtcgatgtcgctgaccttccgcgaccaccgcttc
gagccccctaagaactcgatcgacgagtgcaaggagcgcgacttcacgtacgcggccccg
ctcttcgtcaccgccgagttcaccaacaacgagaccggcgagatcaagtcccagacggtc
ttcatgggcgacttcccgctcatgaccaacaagggcaccttcgtcatcaacggcaccgag
cgtgtcgtggtgtcccagctggtccgctcgccgggtgtctacttcgactcctccatcgac
aagacgtccgacaaggacatcttcaccgccaagatcatcccgtcccggggtgcctggctg
gagatggagatcgacaagcgtgacatggtcggtgtccgtatcgaccgcaagcgcaagcag
tccgtcaccgtcctgctcaaggcgctcggctggaccaccgagcagatcctcgaggagttc
ggcgagtacgagtcgatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgctgctcgacatctaccgcaagctgcgtccgggcgagccgccgacgcgtgaggccgct
cagacgctgctcgagaacctctacttcaacccgaagcgctacgacctcgccaaggtcggc
cgctacaaggtgaacaagaagctcggcgccgacgagccgctggacgccggtgtgctcacc
accgacgacgtcatcgccaccatcaagtacctcgtcaagctgcacgccggcgagaccgag
acggtcggcgagtccggcacccagatcgtcgtcgagaccgacgacatcgaccacttcggc
aaccgtcgtctgcgcaacgtcggcgagctcatccagaaccaggtccgcacgggtctggct
cgtatggagcgcgtcgtgcgcgagcgcatgaccacccaggacgtcgaggcgatcacgccg
cagaccctgatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagc
cagctgtcgcagttcatggaccagaacaacccgctgtcgggtctcacccacaagcgccgt
ctgtcggctcttggtccgggtggtctctcccgtgagcgggccggcttcgaggtccgtgac
gtgcacccgtcgcactacggccgcatgtgcccgatcgagacccctgaaggcccgaacatc
ggtctgatcggctcgctcgcctcctacggccgggtcaacgcgttcggtttcgtcgagacc
ccgtaccgcaaggtcaccgacggtcaggtcaccgacgaggtggactacctgaccgccgac
gaggaggaccgcttcgtcatcgcgcaggcgaacgccacgctgaacgacgagctccgcttc
accgaggcccgcgtgctggtccgccgtcgtggcggcgaggtcgactacgtcccgccggcc
gaggtcgactacatggacgtctcgccgcgccagatggtgtcggtcgcgaccgccatgatc
ccgttcctcgagcacgacgacgccaaccgtgccctcatgggcgcgaacatgatgcgccag
gccgttccgctcatcaaggcggaggccccgctcgtcggcaccggcatggagtaccgctgt
gccaccgacgccggtgacgtgatcaaggccgagaaggacggtgtcatccaggaggtctcg
gccgactacgtcaccgtcgccaacgacgacggcacgtacaccacgtaccgcatcgccaag
ttctcccgctccaaccagggcacctcggtcaaccagaaggtcatcgtctccgagggtgac
cgggtgatcgagggccaggtcctcgccgacggccccgccaccgagaacggtgagatggcc
ctcggcaagaacctgctcgtggcgttcatgccgtgggagggtcacaactacgaggacgcg
atcatcctgtcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggag
cacgaggtcgacgcccgtgacaccaagctcggccccgaggagatcacccgggacatcccg
aacgtctccgaggaggtcctcgcggacctcgacgagcgcggcatcatccgtatcggtgcc
gaggtcgtcgccggcgacatcctggtcggcaaggtcacgcccaagggtgagaccgagctg
accccggaggagcgtctgctccgcgcgatcttcggtgagaaggcgcgcgaggtccgtgac
acctcgctgaaggtgccgcacggcgagaccggcaaggtcatcggtgtgcgcgtcttcgac
cgcgaggagggcgacgagcttcccccgggcgtcaaccagctggtccgcgtctacgtggcc
cagaagcgcaagatcaccgacggtgacaagctcgccggccgtcacggcaacaagggcgtc
atctcgaagatcctgccgatcgaggacatgccgttcctggaggacggcaccccggtcgac
atcatcctcaacccgctgggtgtcccgtcccgaatgaaccccggacaggtcctggagatc
cacctcggctggctcgccagccgcggctgggacgtctccggcctggcggacgagtgggcg
gagcgcctgcaggccatcggcgcggacaacgtcgcgccgggcaccaacgtcgcgaccccg
gtcttcgacggtgcccgcgaggacgagctggccggcctgctgcagcacacgatcccgaac
cgcgacggcgagcgcatggtgctcccgaccggtaaggcgcgtctgttcgacggccgctcc
ggcgagccgttcccggacccgatctcggtcgggtacatgtacatcctcaagctccaccac
ctggtcgacgacaagctgcacgcccgttcgaccggtccgtactcgatgatcacccagcag
ccgctgggtggtaaggcccagttcggtggccagcggttcggagagatggaagtgtgggca
ctcgaggcgtacggagcggcctacgccctccaggaactgctgaccatcaagtccgacgac
gtgaccggccgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccccgagccc
ggcattcccgagtccttcaaggtgctcatcaaggaaatgcagtcgctctgcctcaacgtg
gaggtgctctcctcggacggcatgtccatcgagatgcgcgacacggacgaggacgtcttc
cgcgccgcggaggagctcggtatcgacctgtcccggcgtgagccgagcagcgtcgaagag
gtctga
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integrated database retrieval system
