Streptomyces peucetius subsp. caesius: CGZ69_27305
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Entry
CGZ69_27305 CDS
T07792
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
speu
Streptomyces peucetius subsp. caesius
Pathway
speu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
speu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGZ69_27305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
speu03019
]
CGZ69_27305
03400 DNA repair and recombination proteins [BR:
speu03400
]
CGZ69_27305
Enzymes [BR:
speu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CGZ69_27305
Messenger RNA biogenesis [BR:
speu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CGZ69_27305
DNA repair and recombination proteins [BR:
speu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CGZ69_27305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
Pribosyltran
DUF294_C
Motif
Other DBs
NCBI-ProteinID:
ATW51025
LinkDB
All DBs
Position
complement(5995200..5997371)
Genome browser
AA seq
723 aa
AA seq
DB search
MTNADRAELRASADSVLARLVSDASGRARLREDQWRAIEALVAEKRRALVVQRTGWGKSA
VYFVATSLLRASGSGPTVIVSPLLALMRNQVEAAARAGIRARTINSSNTEEWETVQSEIA
AGEVDVLLVSPERLNNPDFRDQVLPRLAAATGLLVVDEAHCISDWGHDFRPDYRRLRTML
ADLPAGVPVLATTATANARVTADVAEQLGTGAGTDALVLRGPLDRESLSLGVLELPDAAT
RLAWLADHLGELPGSGIIYTLTVAAAEEVTAYLRQCGHPVASYTGRTENADRQQAEEDLL
ANRVKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHAEVLLLPGKE
DEAIWQYFASVAFPPEELVRRTLDVLAQAERPLSLPALEPLVELRRTRLETMLKVLDVDG
AVRRVKGGWTTTGQPWSYDADRYAWVARQRTSEQQAMREYARSTGCRMEFLRRQLDDEEA
SRCGRCDNCSGARFSDKVSTAALDAARGELGRPGVEVEPRKMWPTGLAAVGINLKGRLAE
GEQSFTGRALGRLSDIGWGNRLRPMLAPQAPDGPVPDDMADAVVTVLSDWARGPGGWASG
AVDAPQRPAGVVTVASRSRPRLIGSLAGRIGEVGRMPLLGSVEYVPEALDTGFSRTNSAQ
RVRALHEAFVVPPQLAEALAAADGPVLLVDDYSDSGWTLAVASRLLRRAGAKGVFPLVLA
IQS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgcagaccgcgcggagctcagggcttccgccgattccgtactggcccggctc
gtctccgacgcatcgggccgcgcccggctgcgcgaggaccagtggcgcgcgatcgaggcg
ctcgtcgcggagaagcgcagggcactggtcgtccagcggacgggatggggcaagtccgcg
gtgtacttcgtcgccacctcgctgctgcgggcgagcggcagcggccccaccgtgatcgtc
tcacccctgctcgcgctgatgcgcaaccaggtggaggccgcggcgcgggccggcatccgc
gcccggacgatcaattcctccaacacggaggagtgggagacggtccagtccgagatcgcc
gcgggcgaggtcgatgtgctgctggtcagtcccgagcggctcaacaaccccgacttccgc
gatcaggtgctcccccggctggctgcggcgaccggactgctcgtggtggacgaggcccac
tgcatctccgactggggccacgacttccggcccgactaccgcaggctccgcaccatgctc
gccgacctgcccgcgggcgtccccgtccttgccacgaccgccaccgccaatgcacgggtc
acggcggacgtggcggaacagctgggcacgggagcgggcaccgacgccctcgttctgcgc
ggcccactggacagggagagcctgagcctcggggtgctggagctcccggacgccgccacc
cgtctggcctggctcgccgatcatctcggcgagctgcccgggtccggcatcatctacaca
ctcacggtcgccgccgccgaagaggtcaccgcgtatctgcgccagtgcggtcaccccgtg
gcttcgtacaccggacgcacggagaacgcggaccggcagcaggcggaggaggacctgctc
gccaaccgcgtcaaggctctggtggcgacgtcggcactcggcatgggcttcgacaaaccg
gacctcggcttcgtcgtgcacctcggttcgccctcgtccccgatcgcgtactaccagcag
gtgggccgcgccggccgtggtgtggaacatgcggaggtgctgctgttgcccggcaaggag
gacgaggcgatctggcagtacttcgcctcggtcgccttcccgcccgaggaactcgtacgg
cgcacgctcgacgtgctggcgcaggccgagcggcctctgtcgttgccggcgctggagccg
ttggtggaactgcggcgcacccggctcgagaccatgctcaaggtgctggacgtggacggc
gccgtgcgcagggtgaagggcggctggacgacgaccggacagccctggtcctacgacgcg
gaccggtatgcgtgggtggcccggcagcgcacctccgagcagcaggctatgcgggagtac
gcgcgctccaccggatgccggatggagttcctgcggcgccagctggacgacgaggaggcg
tcgcgctgcggccgctgcgacaactgctccggcgcccggttcagcgacaaggtgtccacc
gccgctctggacgcggcgcgtggggagctcggcaggccgggggtcgaggtcgagccccgc
aagatgtggccgaccgggctggccgccgtcggcatcaacctcaagggccgtcttgcggag
ggtgagcagtccttcaccgggcgggcgctggggcggctttccgacatcggctggggcaac
cggctccgtccgatgctcgctccccaggcgccggacggcccggtgcccgacgacatggcc
gacgcggtcgtgaccgtgctctccgactgggccagggggccgggcggttgggcctccgga
gccgtggacgcgccgcagcgcccggcgggcgtggtcacggtcgcctcccgcagccggccc
cgtctgatcggctccctcgccggccgcatcggggaggtcggccggatgccgctgctgggc
tcggtcgagtacgtgccggaggccctggacacagggttctcgcgcaccaacagcgcccag
cgggtgcgggccctgcacgaggcgttcgtcgtaccgccacaactggcggaggcgctggcc
gccgcggacggtccggtgctgctggtcgacgactactcggacagcggatggacgctggcc
gtggcctcgcgactgctgcgcagggcgggcgcgaagggggtgttcccgctggtcctcgcg
atccagtcctga
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integrated database retrieval system
