Streptococcus pyogenes Manfredo (serotype M5): SpyM50706
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Entry
SpyM50706 CDS
T00497
Name
(GenBank) DEAD box helicase family protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
spf
Streptococcus pyogenes Manfredo (serotype M5)
Pathway
spf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SpyM50706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spf03019
]
SpyM50706
03009 Ribosome biogenesis [BR:
spf03009
]
SpyM50706
Enzymes [BR:
spf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SpyM50706
Messenger RNA biogenesis [BR:
spf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SpyM50706
Ribosome biogenesis [BR:
spf03009
]
Prokaryotic type
rRNA helicases
SpyM50706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
DUF1924
Motif
Other DBs
NCBI-ProteinID:
CAM30039
LinkDB
All DBs
Position
704026..705645
Genome browser
AA seq
539 aa
AA seq
DB search
MKFTEFNLSQDIQSAVVTAGFEKASPIQEMTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
NKIRTNENIIQALVIAPTRELAVQSQEELFRFGREKGVKVRSVYGGSSIEKQIKALKSGA
HIVVGTPGRLLDLIKRKAVILDHVETLILDEADEMLNMGFLEDIEAIISRVPADRQTLLF
SATMPAPIKQIGVKFMKDPEHVQIKNKELTNVNVDQYYVRVKEQEKFDTMTRLMDVNQPE
LSIVFGRTKRRVDEITRGLKLRGFRAEGIHGDLDQNKRLRVIRDFKNDQIDILVATDVAA
RGLDISGVTHVYNYDITQDPESYVHRIGRTGRAGKSGESITFVSPNEMGYLSMIENLTKK
QMKPLRPATAEEAFQAKKKVALKKIERDFADETIRSNFDKFKGDAVQLAAEFTPEELALY
ILSLTVQDPDSLPEVEIAREKPLPFKYVGGGHGNKNGKGGRGRDNRNRGDRRGGYRGDRN
RDERDGDRRRQKRDKRDGHDGSGNRDFKRKSKRNSKDFFNKEKKSSAKNTGFVIRHKGE
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagaatttaacttatcacaagacatccaatcagctgttgttaccgctggt
tttgagaaagcatctcctatccaggaaatgacgattcctctcgcactagaagggaaggat
gttattggtcaagcacaaacaggaactggtaaaacagcagcgtttggtctaccaaccttg
aataagattcgtactaacgaaaatatcatccaagcattggtcattgcaccaacgcgtgaa
ttggctgtacaaagtcaggaagaattgttccgttttggacgtgaaaaaggggttaaggtt
cgctctgtttacggtggatcaagtattgaaaaacaaatcaaagcccttaaatcaggtgcc
cacattgtcgtgggaacaccgggtcgcttgttagatttgattaagcgcaaggctgttatt
ttagatcatgtggaaaccttaatccttgatgaagcagatgaaatgcttaacatgggattc
ttggaagacattgaagctattattagtcgtgtcccagcagaccgtcaaaccttgctcttc
tccgcaacgatgccggcacctattaaacaaatcggggttaaattcatgaaagaccctgaa
catgttcaaattaagaacaaagaattaacaaacgtcaatgttgatcaatactatgttcgt
gtgaaagaacaagaaaaatttgatactatgacccgtctgatggatgttaaccagccagaa
ttatccatcgtttttgggcggactaagcgccgagttgatgaaattacacgtggcttgaaa
cttcgtggtttccgtgccgaaggaatccatggtgatcttgaccaaaataaacgcttacgt
gttatccgtgatttcaaaaacgaccaaattgatattcttgttgccactgatgtagcagcg
cgtggccttgatatttcaggagttacccacgtttataactacgatattacccaagatcca
gaaagttatgttcaccgtattggtcgtacaggtcgtgccggtaaatctggtgagtctatc
acttttgtctcaccaaatgagatgggctacctctcaatgattgagaacttaacgaaaaaa
cagatgaaacctcttcgtccagcaactgctgaagaggcctttcaagccaagaaaaaagta
gccctcaagaaaattgaacgcgactttgcggatgagactattcgttcaaactttgataaa
ttcaaaggcgatgctgtccaattggctgccgaattcactcctgaagaattagctttatat
attttgagcttaacggttcaagatccagatagcttaccggaagttgaaattgcacgtgaa
aaaccattaccattcaaatatgtgggtggtggtcacggcaataaaaatggcaaaggtggt
cgtggacgtgacaaccgtaaccgtggtgatcgccgtggcggctatcgtggtgaccgtaac
agagatgagcgtgatggtgaccgtcgtcgtcaaaaacgtgataagcgtgatggtcacgat
ggcagtggcaaccgcgatttcaaacgtaaatcaaaacgtaatagtaaagactttttcaat
aaagagaaaaaatcaagtgctaaaaatactggttttgtgattcgtcacaaaggtgaataa
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