Streptococcus pyogenes Manfredo (serotype M5): SpyM51012
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Entry
SpyM51012 CDS
T00497
Name
(GenBank) metallo-beta-lactamase superfamily protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
spf
Streptococcus pyogenes Manfredo (serotype M5)
Pathway
spf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SpyM51012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spf03019
]
SpyM51012
Messenger RNA biogenesis [BR:
spf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SpyM51012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
DUF6175
ODP
Motif
Other DBs
NCBI-ProteinID:
CAM30339
LinkDB
All DBs
Position
complement(1020045..1021706)
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AA seq
553 aa
AA seq
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MTDIKMIALGGVREYGKNFYLVEINDSMFILDAGLKYPENEQLGVDLVIPNLDYVIENKG
KVQGIFLSHGHADAIGALPYLLAEVSAPVFGSELTIELAKLFVKSNNSTKKFNNFHVVDS
DTEIEFKDGLVSFFRTTHSIPESMGIVIGTDKGNIVYTGDFKFDQAAREGYQTDLLRLAE
IGKEGVLALLSDSVNATSNDQIASESEVGEEMDSVISDADGRVIVAAVASNLVRIQQVFD
SATAHGRRVVLTGTDAENIVRTALRLEKLMITDERLLIKPKDMSKFEDHELIILEAGRMG
EPINSLQKMAAGRHRYVQIKEGDLVYIVTTPSTAKEAMVARVENLIYKAGGSVKLITQNL
RVSGHANGRDLQLLMNLLKPQYLFPVQGEYRDLAAHAKLAEEVGIFPENIHILKRGDIMV
LNDEGFLHEGGVPASDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVSKKEKRIISK
AKVNTRGFVYVKKSHDILRESAELVNTTVGNYLKKDTFDWGELKGNVRDDLSKFLFEQTK
RRPAILPVVMEVR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgactgatattaaaatgattgccttgggaggggtccgtgaatacggaaaaaacttctat
ttggtagaaattaacgattctatgtttattttagacgcagggctcaagtaccccgaaaat
gagcaacttggggtagatttagtcatccccaatttagattatgtaattgaaaacaaaggt
aaagtacaagggattttcttgagtcatggccatgctgacgccatcggagcccttccttat
ttgttagctgaagtatcagctcctgtatttggatctgaattgactattgaattagccaag
ctatttgtgaaaagtaataacagcactaagaaatttaataattttcatgtggtagacagt
gatactgaaattgaatttaaagatggcctagtttcgttctttagaacaacgcattcaatc
ccagaaagtatgggtattgttattggaacagataaaggaaacattgtttataccggtgac
ttcaaatttgatcaagcggcaagagaaggttatcagacggatttgctacgtttagctgag
attgggaaagaaggggttctagctcttttatcagattcagtcaatgcgacaagcaacgat
cagattgccagcgaatctgaagttggtgaagaaatggacagtgttatctctgatgctgat
ggccgtgtcattgtagctgcagtagcctcaaatcttgttcggattcagcaagtatttgat
tccgccactgcccatgggcgtcgtgttgttttaaccggaacagatgcagaaaacattgtc
agaacagccttacgtctagaaaaattaatgattacggatgagcgtcttttaattaaacct
aaggatatgtctaaattcgaagaccatgaattaatcatccttgaagctggtcgtatgggt
gagccaattaatagcttacaaaaaatggcagcgggacgtcaccgttatgttcaaatcaaa
gaaggagaccttgtttatattgtaacaacaccaagtacggctaaagaagctatggtggcg
cgtgttgaaaacttgatttacaaggccggtggttctgttaaattaatcactcaaaactta
cgcgtgtcaggccatgctaatgggcgtgatttgcaactattgatgaatttgttaaaaccc
cagtatctttttccagtacaaggagaatatcgtgatttagctgcccatgcaaagctagct
gaagaagttggtatttttccagagaatattcatattctgaagcgtggcgatatcatggtg
cttaatgacgaaggttttctccatgaaggaggtgtacctgccagtgatgtcatgattgac
ggtaatgctatcggtgatgtgggtaatatcgtcttacgagaccgtaaagtcttgtcagaa
gatggtattttcattgttgctattactgtttctaaaaaagaaaaacgcattatttctaag
gccaaagttaatacgcgtggatttgtgtatgtcaagaaaagtcatgatattttaagagaa
agtgcagaattagttaatacaactgttggcaattacttaaaaaaagatacctttgactgg
ggcgaattaaaagggaatgtcagagatgatttgtctaaattcttatttgaacaaaccaaa
aggcgcccagcgattctgccggttgtgatggaagttcgttag
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