Streptococcus pyogenes Manfredo (serotype M5): SpyM51080
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Entry
SpyM51080 CDS
T00497
Name
(GenBank) putative single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
spf
Streptococcus pyogenes Manfredo (serotype M5)
Pathway
spf03410
Base excision repair
spf03430
Mismatch repair
spf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SpyM51080
03430 Mismatch repair
SpyM51080
03440 Homologous recombination
SpyM51080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spf03400
]
SpyM51080
DNA repair and recombination proteins [BR:
spf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SpyM51080
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SpyM51080
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SpyM51080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
ssDNA-exonuc_C
DHH
DHHA1
Glyco_transf_52
Motif
Other DBs
NCBI-ProteinID:
CAM30406
LinkDB
All DBs
Position
complement(1077503..1079713)
Genome browser
AA seq
736 aa
AA seq
DB search
MIKSKYSWKIKDKKPDDGFFKLAKTKGLTQTAAQLIYERGIRTEEALDEFLTADLSQLHD
PYLLHDMAKAVPRIRQAIEEGERILIYGDYDADGMTSASIVKETLDMMGAEPLVYLPNRF
TDGYGPNQSVYKYFIEQEAVSLIITVDNGVAGHEAIRYAQEQEVDVIVTDHHSLPEELPE
AFAIIHPEHPDADYPFKHLAGCGVAFKLATALLESLPTDCLDLVAIGTIADMVSLTGENR
VLVKNGLAMLKHTERVGLQELMSLSPIDLEHFNEDAIGFQIAPQLNALGRLDDPNPAIEL
LTGFDDQEAQAIALMIKKKNEERKALVQDIFDQAMAMVDPQKPVQVLAQAGWHPGVLGIV
AGRIMETIGQTVVVLTIDNGFAKGSARSLEAINIFEALNGKRELFTAFGGHAGAAGMTLP
VDNLEALSDSLCQFVIERGLDQTAKNTLTIDERLSLDDLSLDILKSLDKLAPYGMDHQKP
VFYVKDIRVSQARTIGQDQSHLKFKVSQGKASFDVLAFGQGSQLQEFRQATGLELAVTLS
VNHWNGNTSLQFMLVDARVDGVQLLDLRTKTAKVPEGIPTIEEDPNARVILINDIPEDFK
TWRNQFVHKDFDAIYFKNQMKHPYYLTGFGSREQFAKLYKTIYQFPEFDLRHKLTELSHY
LNIEKLLLIKLIQIFEELSFVTIDDGLMTVNPQAQKREISESHIYQDLKELVKFQEIMAL
ASPKEMYDYLVKSNDQ
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgattaaatccaaatatagctggaaaataaaagacaagaagccagatgatggcttcttt
aagctagcaaagacaaaaggtctaacccagaccgccgctcagttgatttatgagcgaggg
ataaggactgaagaagccttagatgagtttttaacagcggacttgtctcaactgcatgat
ccttacttgctacatgacatggcaaaagctgtgccaagaattcgtcaagctattgaagag
ggcgaacgaattctcatttacggcgactatgatgctgatggcatgacgtcggcttctatt
gtcaaagaaaccctagacatgatgggagcagagcctttggtttatcttcccaaccgcttt
acagatggctatggccccaaccagagcgtctataaatattttattgagcaggaagctgtg
tccctaattatcacggttgataatggcgtggccggacatgaagcgattagatatgctcaa
gaacaggaagttgatgtcattgtaactgaccatcatagcctgcctgaagaattgccagaa
gcctttgccatcattcatcctgagcatcctgatgctgattatccctttaaacacttagct
ggctgtggcgttgcctttaaattggcaacagctttgctagaaagtttaccaacagactgt
ctagacttggtagctattggaaccattgccgatatggtaagcttgacaggtgaaaaccgt
gttttagtcaaaaatggtctggccatgctcaaacacaccgaaagagtgggcttgcaggag
ttgatgtccttatctcctattgatttggaacattttaatgaagacgccattggctttcag
attgctccgcaattaaatgctttagggcgcttagatgaccctaatccagccattgagcta
ctgacgggctttgatgaccaagaagctcaagcgattgccttgatgattaagaaaaaaaat
gaagagcgtaaagccttagtccaagacatttttgatcaagcgatggctatggttgatcct
caaaaacctgttcaagtcttggcacaagctggctggcatcctggtgttctaggaattgtc
gctggtcgtatcatggaaactattggacaaacggtcgtcgttttgaccattgataatggc
tttgcaaaaggctcggccagaagtttagaagctattaatatttttgaagccttgaatggc
aagcgtgagttatttacagcctttgggggacatgctggtgcagcaggaatgaccctgccc
gttgacaacttggaagctctttcagactctctttgtcagtttgtgatagaacgtggctta
gatcagactgccaaaaatacgttaactattgatgaaagactgtctttggacgaccttagc
cttgatattttaaagagtttagataaattagccccttatgggatggatcatcaaaagccg
gtcttttatgtcaaggacataagggttagtcaagcgcgtaccatagggcaagaccagagc
catcttaaatttaaagtcagtcagggcaaagcttcctttgacgtactggcttttggtcaa
ggaagtcaactgcaagagtttcgacaagctactggtttagaattagcagttaccttatct
gtcaaccattggaatgggaacacgagtctccaattcatgttagtagatgctcgtgttgac
ggagtgcaacttcttgacttaaggacaaaaacagccaaagttcctgaaggtattccgact
attgaagaagacccaaatgccagagtcattctgattaatgacatccctgaagatttcaaa
acctggcgcaaccagtttgttcacaaggattttgacgccatctattttaaaaatcagatg
aaacatccttattatttaacaggatttggcagcagagagcagtttgccaagctctacaaa
accatctatcagtttcctgaatttgatttacgacataaattgacagagttgagtcactat
ttaaacatagaaaaacttttactgattaagttgattcaaatttttgaagagttgtctttt
gtgacgattgacgatgggctgatgacggttaacccccaagcgcaaaaacgagagatttca
gagagccacatttaccaagacttaaaagaattggtgaaatttcaagaaatcatggctttg
gctagcccgaaagagatgtatgattatttggtgaaatcaaacgatcaataa
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