Sphingopyxis sp. FD7: SPYCA_0004
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Entry
SPYCA_0004 CDS
T10393
Symbol
yidC
Name
(GenBank) membrane protein insertase YidC
KO
K03217
YidC/Oxa1 family membrane protein insertase
Organism
spfd Sphingopyxis sp. FD7
Pathway
spfd02024
Quorum sensing
spfd03060
Protein export
spfd03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SPYCA_0004 (yidC)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SPYCA_0004 (yidC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPYCA_0004 (yidC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
spfd03029
]
SPYCA_0004 (yidC)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
spfd02044
]
SPYCA_0004 (yidC)
Mitochondrial biogenesis [BR:
spfd03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
SPYCA_0004 (yidC)
Secretion system [BR:
spfd02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SPYCA_0004 (yidC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YidC_periplas
60KD_IMP
Motif
Other DBs
NCBI-ProteinID:
BBB10746
UniProt:
A0A2Z5UHD8
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Position
complement(3679..5439)
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AA seq
586 aa
AA seq
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MDDKRNLIAAILLSVAILIGWNFVAERFFPTPAQPDVTRTVARANGAPASAPVAQGQPSA
LPAPAATAPAAPAAQAIRPVDVVLAEGQRIPIETPAIRGSINLTGARIDDITLTKYRQTI
KKDSPPVRLFAPGGTPAAYFASLGWAAEGVRVPGANSVWTANGSKLTPTSPVTLSWANGT
GQTFRIEYSIDANYLITAKQTVVNAGTAPVSLNSFALIDRLGKPTDPHEVDSWTIHVGPT
GYLDGKSVFDVDYDDVEEAANRSVRYASAGWLGFTDKYWLAAIIPARGERVTAAISSPAA
NNYQTLFARDFTEVAPGQQLTATSRIFAGAKEVEILETYQNDQGITRLSNAIDWGWFEFF
EVPIFKLLHWLFLQLGNFGLAIMALTLIIRLLMFPIANRQFSSMAQMRVVQPKMKALQDR
YKDDKPRMQQELMKLYKDEKINPLAGCLPILIQIPIFYALYKVLMLAIEMRHQPFILWIK
DLSAPDPLHILNLFGLLPFTPPSILAIGLLAVILGVTMWLQFRLNPAPADPVQAQVFKIM
PWLFMFIMAPFAAGLLLYWITNNILSIGQQQWMYRKFPALKAAPAK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
gtggacgacaagcgtaacctgatcgcggcaatcctgttgtcggtggcgattctgatcggc
tggaacttcgtcgccgagcggtttttcccgactcccgcacagcccgacgtgaccaggacc
gtcgcccgcgccaatggcgcgcccgccagcgcccccgtggcgcagggtcagccgagcgcg
ctgcctgccccggcggccaccgcgcccgccgccccggctgcgcaggcgatccgcccggtc
gacgtcgtgctcgccgaaggacagcgcattccgatcgaaaccccggcgatccgcggctcg
atcaacctcaccggcgcgcgcatcgacgacatcacgctcaccaaatatcgccagacgatc
aagaaggattcgccgccggtgcgcctgttcgcgccgggcggcacgcccgccgcctatttc
gccagcctcggctgggcggctgagggcgtccgggttccgggcgccaacagcgtctggacc
gcgaacggcagcaagctgaccccgaccagcccggtgaccttgagctgggcgaacggcacg
ggccagaccttccgcatcgaatatagcatcgacgccaattatctgatcaccgcgaagcag
acggtcgtgaatgcgggcaccgcgccggtgtcgctgaacagctttgcgctgatcgaccgc
ctcggcaagccgaccgacccgcacgaggtcgacagctggacgatccatgtcggcccgacg
ggctatctcgacggcaagtcggtgttcgatgtcgattatgacgatgtcgaggaagccgcg
aaccgcagcgtgcgctacgcttcggcgggctggctgggcttcacggacaaatactggctc
gccgcgatcatcccggccaggggcgagcgcgtgaccgcggcgatcagttcgcccgccgcg
aacaattaccagacgcttttcgcgcgtgactttactgaggtcgcgccggggcagcagctg
acggcgaccagccgtatcttcgccggcgcgaaggaagtggagattctggagacctatcag
aacgaccagggcatcacccgcctgtcgaacgcgatcgactggggctggttcgaatttttc
gaggtgccgatcttcaagctgctccactggctgttcctgcagctcggcaatttcggcctc
gcgatcatggcgctgaccttgatcatccgcctgctgatgttcccgatcgccaaccggcag
ttttcgtcgatggcgcagatgcgcgtcgtccagccgaagatgaaggcgctgcaggaccgc
tacaaggacgacaagcccaggatgcagcaggagttgatgaagctctataaggacgagaag
atcaatccgctcgcgggctgtctgccgatcctgatccagatccccatcttctatgcgctg
tacaaggtgctgatgctggcgatcgagatgcggcaccagccgttcatcctgtggatcaag
gatctgtcggcgcccgacccgctgcacatcctcaatctctttggcctgctccccttcacc
ccgccgtcgatcctcgcgatcgggctgctcgcggtgatcctgggcgtgacgatgtggctc
cagttccgcctgaaccccgcccccgccgacccggtgcaggcgcaggtgttcaagatcatg
ccctggctgttcatgttcatcatggcgccgttcgccgcgggcctgctcctctactggatc
accaacaatatcctgtcgatcgggcagcagcagtggatgtatcgcaagttcccggcgttg
aaggcggcgccggcgaagtga
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