Sphingopyxis sp. FD7: SPYCA_0030
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Entry
SPYCA_0030 CDS
T10393
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spfd Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spfd02000
]
SPYCA_0030
Transporters [BR:
spfd02000
]
Other transporters
Pores ion channels [TC:
1
]
SPYCA_0030
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
BBB10772
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Position
30252..33335
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AA seq
1027 aa
AA seq
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MRSGLNPQLFFAATASTIALIASPATAQSQDDDAIVVTGSRIAKSEFTSADPIQIIDPEA
AKQQGQVELVGVLRSAPAAQGSIQISSAISNRFVANGGNDVQSLSLRGLGAERTLVLING
RRAGPAGIRGAVAPFDLNVLPLSVVRQVELLKTGASSIYGSDAVAGVVNILTRDDLNGFE
GGGFSSVTEHGGGESHGADASFGKTFGRGHFFATVDVFRQQNLTRRDRDFLFCSEEYLKR
EADGSRADIVDFRTGQPACSSALGNAIVFADFSGVDQNGFPTFGPGLIAPNGRAIFAGQY
GAEFAAVGIPINAYNPIGVFGPTDFFGVNFDGPSTGALNQFEPAEQDMDVFSSVSRVSVF
ADGAYEVSDGVTAYGEFLFSNRKSHNNGFQRIELDQFTGASFLPMFLCDPTQFNCDPGDP
GDPLNAEFGGNIILRPRVIVTSQSEADVDYYRGVLGLRGDLGAGWKWDVHGQHSRSDAGY
TQDVLYRDALASQTLRTRSCVGTVTAIRGADCIDIDFTDPRVLRGDLTAEERAFLTGRET
GRTLFEQSSAEALLTGKLFDLPAGPVGAAFGATIRRDEINDTPGDATRAGNVANFTTSGI
TAGRTVSKEVFGEVELPLLEGVPMIERLTLSGAARYTHVEATRRDGVSDRFSDTTWKVGA
DWAVTGWLRLRGTWGTSFRAPALFELFLEDQTGFLGQAAIDPCIQTAARLAAGAISQRVF
DNCAADGIAPDYAGGIGPATIVSGGGIGRLKPESSTAKTVSLILTPDVSGALWGGLRTRL
AVDYFDIKVRQEITLLGAGNILSGCYDSELFPDEPLCALFTRATAGPDAQSVASVTDRYV
NISRQRNRGVDLSLALDQDLGRLGSLAFRAQMTWQVEDKVALFPGTTIDDNGTIGNPKWV
GDFTLGWTKDQWTLFYGLDVTGAASNRAELLRAQGGDPCRTSSFRPGGRFCPDVSVPATF
YHSLSLSRDVAERFRITLGIANLFDTPPPRVSTVVTATPPVIGQAPAFGTQYDYLGRRMF
LNVRGRL
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgagatcgggcctcaacccccagctgtttttcgccgcgacggcgtcgaccatcgcgctg
atcgcatcgcccgccaccgcgcagagccaggacgacgacgcgatcgtcgtcaccgggtcg
cggatcgcgaagagcgagttcaccagcgccgatccgatccagatcatcgaccccgaagcc
gcaaagcagcaagggcaggtcgagctggtcggcgtgctgcgatccgcgcctgccgcgcag
gggtcgatccagatcagctccgcaatctcgaaccgttttgtcgccaatggcggcaatgac
gtgcagtcgctgtcgctgcgcggccttggcgccgaacgcacgctggtgctcatcaacggc
cgccgcgcagggcccgcggggattcgcggcgcggtcgcgcccttcgacctcaatgtgctg
ccgctgtcggtggtccggcaggtcgagctgctcaagaccggtgcctcgtcgatctatggg
tcggatgcggtggccggggtggtcaatatattgacccgcgacgacctgaacggctttgaa
ggcgggggtttttcgtcggtcaccgagcatggcggcggcgaaagccatggcgccgacgca
agctttggcaagacgttcggccgtggccatttttttgcgacggtcgatgtcttccgccag
cagaatctgacgcgccgcgaccgcgatttccttttctgttcggaggaatatctgaagcgc
gaagccgatggcagccgcgccgacatcgtcgatttccgcaccgggcagcccgcgtgcagc
agcgcgctgggcaacgccatcgtgttcgccgatttttcgggcgtcgaccaaaatggcttt
ccgacctttggccccgggctgatcgcgccgaacgggcgggcgatttttgccggccaatat
ggcgccgagttcgctgccgtcggcatcccgatcaatgcctataatccgatcggcgtattc
ggccccaccgatttcttcggggtcaatttcgacgggccttcgacgggagcgctcaaccag
ttcgagccggccgaacaggatatggatgtgttttcgtccgtcagccgggtgagcgtcttt
gccgatggcgcatatgaggtgagcgatggcgtcaccgcctatggcgagtttctgttcagc
aaccgcaagtcgcacaataatgggtttcaacggatcgagctcgaccagttcaccggcgcg
tccttcctgccgatgtttctgtgcgatccgacgcagttcaattgcgatcccggcgacccc
ggcgatccgctcaacgccgagttcggcggcaacatcatcctgcgcccgcgggtgatcgtg
acgtcgcagagcgaggccgacgtcgattattatcgcggcgtgctggggttgcgcggcgac
cttggcgcggggtggaagtgggatgtccacggccagcacagccgctcggacgcgggctat
acgcaggatgtcctctatcgggacgcgctggcgtcgcagaccttgcgcacgcgctcgtgc
gtcgggacggtgaccgcgatccgcggcgcggactgcatcgacatcgactttaccgatccg
cgcgtgctccgcggcgacctcacggcggaggaacgcgccttcctgacggggcgcgagacg
gggcggaccttgttcgagcaaagctcggccgaggcgctgctgacgggcaagctgttcgac
ctgcccgccggtccggtgggtgcggcgttcggtgcgacgatccgccgcgacgaaatcaat
gacacgccgggcgacgcgacgcgcgcgggcaatgtcgccaacttcaccacttcgggaatc
accgcggggcgcaccgtgtcgaaggaggttttcggcgaggtcgaactgccgctgctcgaa
ggcgtgccgatgatcgagcggctgacgctgtcgggcgcggcgcgctacacgcatgtcgag
gcgacgcgccgcgacggcgtgtccgaccgcttcagcgacacgacgtggaaggtcggcgcc
gactgggcggtgaccggctggctgcgcctgcgcggcacctggggcacctcgttccgcgcg
cccgccctgttcgagctgttccttgaggatcagacgggtttcctcggccaggccgcgatc
gacccgtgcatccagaccgcggcgcggctggcggcgggggcgatcagccagcgcgtcttc
gacaattgcgcggccgacggcatcgcgcccgactatgccggggggatcggccccgcgacg
atcgtgtcggggggcggcatcggccggctgaagcctgaaagctcgaccgcaaagacggtc
tcgctcatcctgacccccgatgtgtcgggggcgctgtggggcgggctgcgcacgcggctg
gctgtcgattatttcgacatcaaggttcggcaagagatcaccttgctgggcgcgggcaat
atcctgtcgggctgttatgattcggaacttttccccgacgagccgctgtgcgcgttgttt
acgcgggcgaccgctggccccgacgcgcagagcgtcgcgtcggtcaccgaccgctatgtc
aatatcagccgccagcggaatcgcggcgtcgacctgtcgctcgccctcgatcaggatctg
ggcaggctgggctcgctggcgttccgcgcgcagatgacgtggcaggtcgaggacaaggtc
gcgctgttccccggcacgaccatcgacgacaatggcacgatcggcaatccgaaatgggtc
ggcgatttcacgctcggctggacgaaggaccaatggacgcttttctatggcctcgacgtc
accggcgcggcgtcgaacagggcggaactgctgcgtgcgcagggcggcgatccgtgccgc
acgtcgagcttccgccccggcgggcgcttctgccccgatgtgagcgtgcccgcgaccttc
tatcattcgctttcgctgagccgcgatgtcgccgagcggttccgcatcacgctggggatc
gccaacctgttcgacaccccgccgccgcgggtgtcgaccgtggtgaccgcaacgccgccg
gtgatcggtcaggcgccagcgttcgggacgcaatatgattatctggggcggcggatgttc
ctgaacgtgcggggacggttgtag
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