Sphingopyxis sp. FD7: SPYCA_0215
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Entry
SPYCA_0215 CDS
T10393
Name
(GenBank) UvrD/REP helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
spfd Sphingopyxis sp. FD7
Brite
Enzymes [BR:
spfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPYCA_0215
DNA repair and recombination proteins [BR:
spfd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SPYCA_0215
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GFIT
Other DBs
NCBI-ProteinID:
BBB10957
UniProt:
A0A2Z5UYM7
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Position
complement(226445..229945)
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AA seq
1166 aa
AA seq
DB search
MTRPAPLATLDPHQRAAADPARHVWLGASAGTGKTQVLSARVLRLLLDGVSPEAILCITF
TRAGAAEMAHRIHERLAMWVRMDERDLRLDLQALGIDLNLLGYDEGVPALIARARALFAT
VIDSPGGAIRVQTIHSFCQTLLASFPLEAKLLPGFRAIEEDEAGALQRRVLGDLLDAPGE
EQAALRAAAAALAQRLGPDAAIGFLSRCASVFGGPGALLPPAAHDLRAAFDLPGGEPDAW
TIDQLAGGAIADADIKAVAASGAAWGTKTGLACSDVMVGWMMGDAAARAAMLDELIGCFL
TGKGNLSADFAGDKGRMTDCVDSAVRIVEAASALRGTATAMRVADELAAAWKLGGRFAEA
YALAKRDQGLADFDDLITLASSLLRVSGFGEWVRFKLDQRTDHILVDEAQDTNMRQWGIV
LSLAEEFFAVHGDDIERARTLFTVGDRKQAIFGFQGTDPRAFASARDLFHALGERAGQDF
EAVDLISNYRSTPAVLEVADAWLAAGGAALMGLDGKEPPHRPYRDAHAGQVELWEPLPVG
KALDAAEEADDAAGDGGHATAPARDPASMRLAKAIAAEVQDWIANGKDGRPVAPGDVMIL
VRRRRDLAARIVARLQALHVPVAGVDRFALTQPLGVQDLMAAMRFAVQPHDDLNLAALLV
SPLIGWTQDELYDRTRDRGRTSLWAHLRAHRDAMPPATMEALGRLLAMADYTTPFRFLET
ILSGPIDGRRKLYARLGREARDPIDELLNQALAFESRKTVSLLGFLAEIEGSAADIKRQT
EARSDVVRVMTVHGSKGLQAPIVILADATDDAAFGHRPFTVDVAAWEKLPVYPVGADERH
GALADAHARARAAADEEHWRLFYVAMTRAEEILVVAGVTRTAERSVPESSWHSAVSGALD
RLGRDWEDGGAIWGRRRVHRVNAGRWAPQAKKAKAAARGAAPLPDWLHRMAPDEARPPRP
LAPSALGEDDVTAPPQGGERAAAVTRGLLLHALFERLPPVAPDRRRAAALRWLAAQASSL
DERARAAMIDEVLAVLDDPAHAPLFGPGSLAEVPLSAVVDGVVVAGIVDRLLVTADAVTV
IDFKTGRHVPGSAAEVQPAYLRQMAAYRDALRVIFPGRNVAAALLYTAAPRLIALGDALL
DAHKPGLLATKANLPGSALEPDASTP
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgacccgccccgcgccgctcgcgacgctcgatccgcatcagcgcgccgccgccgatccc
gcgcgccacgtctggctcggcgcgtcggcggggacgggcaagacgcaggtgctgtcggcg
cgcgtgctgcgtctgctgctcgatggcgtatcgcccgaggcgatcctgtgcatcaccttc
accagggcgggcgccgccgaaatggcgcatcgcatccacgaacggctggcgatgtgggtg
cggatggacgaacgcgatttgcggctcgacctccaggcgctcggcatcgacctcaacctg
ctcggctatgacgagggcgtgcccgcgctgatcgcccgcgcgcgcgccctgttcgcgacc
gtgatcgacagccccggcggcgcgatccgcgtccagacgatccacagtttctgccagacg
ctgcttgcgagctttcccctcgaggcaaagctgcttcccggctttcgcgcgatcgaggag
gatgaggcgggcgcgcttcagcgacgggtgctcggcgacctgctcgacgcgccgggcgag
gagcaggcggcgctgcgcgcggcggccgccgcgctggcgcagcggctcggccccgacgcg
gcgatcggctttctgtcgcgctgcgcgtcggtgttcggggggccgggggcgctgctgccg
cctgcggcgcacgatctgcgcgccgcctttgacctgcccggcggcgagcccgatgcgtgg
acgatcgaccagcttgccgggggcgcgatcgccgacgcggatatcaaggcggtggcggcg
agcggcgctgcgtgggggacgaagaccgggctcgcctgttcggacgtcatggtcggctgg
atgatgggcgatgcggcggcgcgcgccgcgatgctggacgaactcatcggttgtttcctg
accggcaagggcaatctgagtgccgatttcgcgggcgacaagggccggatgaccgactgc
gtcgacagcgcggtgcggattgtcgaggcggcgtcggcgctgcgcgggaccgcgacggcg
atgcgcgtcgccgacgagctggcggcggcgtggaagcttggcggccgcttcgccgaagcc
tatgcgctcgccaagcgcgaccaggggcttgccgatttcgacgacctcatcacccttgcg
agttcgctgctgcgcgtcagcggctttggcgaatgggtgcgcttcaagctcgaccagcgc
accgatcatatattggtcgacgaggcgcaggacacgaacatgcgccaatggggaatcgtc
ctgtcgctcgccgaagagtttttcgcggtgcacggcgacgacatcgaacgcgcgcgcacc
ctgttcaccgtcggcgaccgaaaacaggcgatctttggctttcagggcaccgatcccagg
gcctttgccagcgcacgcgacctttttcatgcgcttggcgaacgcgcggggcaggatttc
gaggcggtcgatctgatttccaactatcggtcgacccccgcggtgctcgaggtcgccgat
gcctggctcgcggcgggcggcgccgcgctgatggggctcgacggaaaggagccgccgcac
cgtccctaccgcgacgcgcacgccgggcaggtcgagctgtgggagccgctgccggtcggc
aaggcgctggacgcggccgaggaggccgacgacgcggccggggatggcggccatgccacc
gcacccgcgcgcgatcccgcgagcatgcggctcgcaaaggcgatcgccgccgaagtgcag
gactggatcgcgaacggcaaggacggccgccccgtcgcgccgggcgacgtgatgatcctc
gtgcgccgccgtcgcgatctggcggcgcggatcgtcgcgcgtttgcaggcgctgcatgtc
cccgtcgcgggggtcgaccgcttcgcattgacgcagccgctcggcgtgcaggatctgatg
gcggcgatgcgctttgcggtacagccgcacgacgacctcaacctcgccgcgctgctcgtg
tcgccgctgatcggctggacacaggacgaactatatgatcgcacgcgggatcgcggccgc
acctcgctgtgggcgcatctgcgcgcgcatcgcgacgccatgccgcccgcgacgatggag
gcgctcggccgattgctcgcgatggccgactatacgacgccgttccgcttcctcgaaacc
atcctctccggcccgatcgacggacggcgcaagctttacgcgcggctggggcgcgaggcg
cgcgacccgatcgacgagctgctgaatcaggcgctggcgttcgagtcgcgcaagaccgtc
tcgctgctcggtttcctcgccgagatcgagggcagcgccgccgacatcaagcgccagacc
gaggcgcgcagcgacgtcgtgcgcgtgatgaccgtccacggctcgaaaggtttgcaggcg
ccgatcgtgatcctcgccgatgcgaccgacgacgcggcctttggccatcgccccttcacc
gtcgatgtcgcggcgtgggaaaaactgcccgtctatccggtcggcgccgacgagcggcac
ggcgcgctggccgatgcccatgccagggccagggcggcggcggacgaggagcattggcga
ctcttctatgtcgcgatgacccgcgccgaagagattctggtggtcgccggcgtgaccagg
accgccgagcgcagcgttcccgagtcgagctggcatagcgcggtatcgggcgcgctcgac
cggctggggcgcgactgggaagatggcggcgccatctggggccgccgccgcgttcaccgc
gtcaacgccgggcgctgggcgccgcaggcgaaaaaggcgaaagcggcggcgcgcggggcg
gcgcccctgcccgattggctgcaccgcatggctcccgatgaggcgcgtccgccgcgcccg
ctcgccccgtcggcgctgggcgaggatgatgtcaccgcgccgccgcaggggggggagcgc
gccgccgcagtgacgcgcggcctgctgctccacgcgctgttcgagcggttgccgcccgtc
gcccccgatcgtcgccgcgccgcggcgctgcgctggctggccgcgcaggcgtcgtcgctg
gacgagcgcgcgcgcgcggcgatgatcgacgaagtgctggcggtgctggacgatcccgcg
cacgcgccgctgttcgggccgggatcgctcgccgaagtgccgctgtcggccgtcgtcgat
ggggtcgtggtcgccggaatcgtcgaccggctgctggtcaccgccgatgccgtgacggtg
atcgacttcaagaccgggcgccacgtccccggaagcgcggccgaggtccagcccgcctat
ctgcgccagatggcggcgtatcgcgatgcgctgcgggtgatttttccggggcggaacgtc
gcggcggcgctgctctataccgcggcgccgcggctgattgcgctcggtgacgcactgctc
gacgcgcacaagcccggcttgctggcaaccaaggcgaatttgccgggctcggcccttgag
ccggacgcgtcgacgccttag
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