Sphingopyxis sp. FD7: SPYCA_0220
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Entry
SPYCA_0220 CDS
T10393
Name
(GenBank) PAS/PAC sensor signal transduction histidine kinase
Organism
spfd Sphingopyxis sp. FD7
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_7
HATPase_c
HisKA
PAS_4
PAS_8
HATPase_c_2
PAS
Motif
Other DBs
NCBI-ProteinID:
BBB10962
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Position
complement(235396..237759)
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AA seq
787 aa
AA seq
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MSGTLSPTLLFALGLFAALWLLAGLWATLRGIAMQRRSAFVAGQAERLASLVEASPQLPV
IVRADWRIEASERLGRWLGLERGPRNFDELRGIGNGLDAASHDMLRQAILGAQRGAKPFQ
LSLKPEGSHRTIIVQGAAAPQAVGGAGSVLLWLSDATEGQQALAHARAERDEALAAFEAL
SGLIEAAPFPMWFRDTDLQLALVNAAYVRAVEAKSAAAVIDGGIELCETVAGVSATDAAD
AARAAGAAQMRTIPVTIEGERRIMRVVDVPLTPEGGRMIGIAGYAIDIQELESERGAHRR
FVDTQRDLLDRLSAAVAQFGPDQGLAFANLPFRRLFGLETEDVAEARPFARLLDAWRERG
RTPEVRDYPEWRQAHVDWFARAEASEEDWRLRDGTHLHVVAQPTPDGGLLLIAEDKTEQV
QLAGARDTLLRVRTATFDNLFEAVAVFAPDGRLHLWNQRFRRLWGVDEPTLAAHPRVDVL
MGGLADRLAKPNQISIVQEVIRAATLERQQRVGEIRFADGRHFDFASIPLPDGNALLIML
DITASRKMEGALRERNEALEAADKAKTAFLSRMSYELRTPLTSIGGFGEMLQAGYAGKLD
DQQRAYVDAIMDSVAVLGRQIDNVLDLAQGEAGTLAIERAPVDVRALLDKALQATRPFAD
AEKVELVGNIAADLGVIEGDAPRLARLVAGLLDNAVRFTAPARKSGGRVLLHADGDKRGI
DIIVSDNGPGMPETAAAVARGQQAGTDTGGIGLALARQLVAAHGGTMEVVSEAGQGTLVR
VSLPRGA
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtacgctttccccgacgctgctcttcgccctcggcctgttcgcggcgctgtgg
ttgctcgccggattgtgggcgactttgcgcgggattgcgatgcagcggcgctcggcgttc
gtcgccgggcaggccgaacggcttgcgagtctggtcgaagcgtcgccacagcttccggtg
atcgttcgcgccgactggcggatcgaggcgagcgaacgactgggtcgctggctggggctc
gaacgcggcccgcgcaatttcgacgaactgcgcgggatcggcaacgggctcgacgcggca
agtcacgacatgctgcgccaggcgatcctcggcgcacagcgcggcgcaaagccctttcag
ctcagcctgaaacccgaaggcagccatcgcacgatcatcgtccagggcgccgcagcgccg
caggcggtcggcggggccggcagcgtgctcctgtggctcagcgacgcgaccgagggacag
caggcgctcgcccatgcccgcgccgaacgcgacgaggcgctggcggcgttcgaggccttg
tcggggctgatcgaggcggcgcccttccccatgtggttccgggacaccgacctgcagctc
gcgctcgtcaacgccgcctatgtccgcgcggtcgaggcgaagagcgccgccgcggtgatc
gacggcgggatcgagctgtgcgaaacggtcgcgggggtgagcgcgaccgacgccgccgac
gccgcgcgcgcagcgggggccgcgcagatgcgcaccatcccggtgacgatcgagggcgag
cggcggatcatgcgcgtcgtcgatgtgccgctgacccccgagggtgggcgcatgatcggc
attgcgggctatgcgatcgacattcaggaactggaaagcgagcgcggcgcgcaccgccgc
ttcgtcgatacgcagcgcgacctgctcgaccggctgtcggccgcggtcgcgcaattcggc
cccgatcagggcctcgccttcgccaacctgccctttcgccgcctgttcggactcgagacg
gaagatgtggcggaagcgcggccgttcgcgcgactgctcgacgcatggcgcgagcgcggc
cggacgcccgaggtgcgcgactatcccgaatggcggcaggcgcatgtcgactggtttgcg
cgggccgaggcaagcgaggaggactggcgcctgcgcgacggcacccacctgcacgtcgtc
gcgcagccgacccccgacggcggactgctgctgatcgccgaggacaagaccgagcaggtc
cagctcgcgggcgcgcgcgatacgctgctgcgcgtgcgcaccgccaccttcgacaatctg
ttcgaagcggtcgcggtctttgccccggatggccgcctccacctctggaaccagcgcttc
cgccgtctgtggggtgtcgatgaaccgacgcttgcggcgcacccccgcgtcgatgtgctg
atgggcggtctcgccgaccggctcgccaaaccgaaccagatcagcatcgttcaggaagtg
atccgcgccgcgacgctcgaacgccagcagcgcgtcggcgagatccgctttgccgacggg
cgccatttcgacttcgcgtcgatcccgctgcccgacggcaatgcgctgcttatcatgctg
gacatcaccgcgagccggaagatggaaggcgcgctgcgcgaacgcaacgaggcactggaa
gcggccgacaaggccaagaccgctttcctgtcgcggatgagttacgaactgcgcacgccg
ctgacctcgatcgggggtttcggcgagatgttgcaggcgggctatgcgggcaagctcgac
gaccagcagcgcgcctatgtcgatgcgatcatggattcggtcgccgtgctcggccgccag
atcgacaatgtgctcgacctcgcgcaaggcgaggcggggacgctggcgatcgagcgcgcg
ccggtcgacgtccgcgcgctgctcgacaaggcgctgcaggccacacgccccttcgccgac
gccgagaaggtcgagctggtgggcaacatcgccgccgaccttggcgtcatcgaaggcgac
gcgccgcggctcgcgcgcctcgtcgccgggttgctcgacaatgcggtgcgcttcaccgcg
ccggcgcgcaaatcgggcggccgcgtgctgctgcacgccgacggcgacaagcgcgggatc
gacatcatcgtctccgacaacggccccggaatgcccgaaaccgccgccgcggtcgccagg
ggacagcaggcgggcaccgacaccggcggcatcggcctcgccctcgcgcgccagctcgtc
gcggcgcatggcgggacgatggaagtggtgagcgaggcgggacagggcacgctggtgcgc
gtcagcctgccgcgcggggcgtga
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