Sphingopyxis sp. FD7: SPYCA_0238
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Entry
SPYCA_0238 CDS
T10393
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spfd Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spfd02000
]
SPYCA_0238
Transporters [BR:
spfd02000
]
Other transporters
Pores ion channels [TC:
1
]
SPYCA_0238
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
BBB10980
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All DBs
Position
259035..261851
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AA seq
938 aa
AA seq
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MTMPTSLRRGASAIAMGLALTAILPVAAMAQDADPAEAGADEEIVVSGFRASLESAVGAK
KERDQIVESISAEDIGKLPDASIAESIARLPGLTSQRVSGRSNSISIRGFAPDFSTTLLN
GREQTSTGDNRAVEYDQYPSEVINQVLVYKTPMASIVGQGLSGTVDLRTIRPLEYGKRVI
SIGARGSLADLGKLNAGSKKYGYRVNGVFVDQFANDTLGVALSASYVDEPYQIQEFNAWG
YAGNGTAASPVVIGGSKSYATSTQLTRLGLQGTLQWQPHPNFTSTLDAFYSDFKDDQIKR
GIELPLAFGGAGVNVTDIDDSGEFVFARAGTFTNVEGVVRNDVFERKAKLYSFGWNNRWE
GDDGWNVTADISLSKTDRNELIFESNAGTGRGGGVGAVDTIGFRSDRNGTVFSPTLNYGD
YGLIQLTSPLGWGGDQTSVDGRRILGGQDGYYNNRIIEDELWQYRVEVERELEGFFRSVQ
FGVNYTDRSKSLVPDEAFVGLVANTDGLTSVPVPEQFRLGTTNLEYLGLGPVISYDPRDL
LAAGLYQLVPNPYGDVVVKAYDVSEKLMTTYVQANIDHEMGSSLLTGNIGVQAIFTDQNS
NGASASFIGTNPNESPNIQGIPQRRSSDYVDVLPSLNLSLRTASDFVIRFSAAREIIRPR
LDDMRASLSYGTTVGDPGGMTCPPGRLCAVVRGGAGNPDLRPWRANAVDLTFEKYFGSKG
YLALQLFYKDLKSYIYNQDIPFDFTGYPIAPVGNDANGNPIIVNYMGTVNAPINGEGGEL
YGAEVAGTLPFGELVGALDGFGVTGGASYTKTKIAPTPGAPAEDIPGYSKWVANGTIFFE
KWGFNARASARYRSSFVGELSGFGGNRVRRRARPETIIDAQIGYDFQPGSALEGLSIFVQ
GQNLTDEPFVTDDPRDARAVIDYQIYGRRFLAGATFKF
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgccgaccagccttcgtcgcggcgccagcgccatcgcgatgggccttgccttg
accgccatcctgcctgttgccgcgatggcgcaggacgccgatcccgccgaagcgggcgcc
gacgaggagatcgtcgtttcgggcttccgcgccagcctcgaaagcgccgtcggcgcgaag
aaggagcgcgaccagatcgtcgaatcgatttcggccgaagatatcggcaagctgcccgac
gcctcgatcgccgaatcgatcgcgcgcctgccgggcctgacgtcgcagcgcgtctccggc
cggtcgaactcgatctcgatccgcggcttcgcgcccgacttttcgacgactttgctcaac
ggccgcgaacagacctcgacgggggacaatcgcgccgtcgaatatgaccaatatcccagc
gaagtgatcaaccaggtgctcgtctacaagacgccgatggcgtcgatcgtcgggcagggg
ctttcgggcaccgtcgacctgcgcaccatccgcccgctcgaatatggcaagcgcgtcatc
tcgatcggcgcgcgcggcagcctcgccgacctcggcaagctcaatgcggggtcgaaaaaa
tatggttatcgcgtcaacggcgtgttcgtcgaccagtttgcgaacgatacattgggtgtc
gcgctgtcggcgagctatgtcgacgaaccctatcagatccaggagttcaacgcctggggc
tatgcgggcaatggcaccgccgccagcccggtggtgatcggcgggtcgaaaagctatgct
acctcgacccagctcacgcgcctcggccttcagggcacgctccagtggcagccgcacccc
aatttcacctcgacgctcgatgccttttattccgacttcaaggatgaccagatcaagcgc
gggatcgaattgccgctcgccttcggcggcgccggggtcaatgtcaccgacatcgacgac
agcggcgagttcgtctttgcccgcgcgggcacgttcaccaatgtcgagggcgtcgtgcgc
aacgacgtgttcgaacgcaaggccaagctctacagctttggctggaacaaccgctgggaa
ggcgacgacggctggaatgtcaccgccgacatcagcctgtcgaagaccgaccgcaacgag
ctgatctttgaaagcaacgccggcaccggtcgcggcggcggcgtgggcgcggtcgacacc
atcggtttccgcagcgaccgcaacggcaccgtgttcagcccgacgctcaactatggcgat
tatggtctcatccagctcaccagcccgctcggctggggcggcgaccagacgagcgtcgac
ggtcgccgtatccttggcggtcaggacggctattacaacaaccgcatcatcgaggacgag
ctgtggcaatatcgcgtcgaagtcgaacgcgagctcgaaggctttttccgctcggtccag
ttcggcgtcaactacaccgaccgctcgaagagcctcgttcccgacgaagcctttgtcggg
cttgtcgccaataccgacgggctgaccagcgtgccggtgcccgaacagttccgcctgggc
accaccaacctcgaatatctcgggctcggtccggtcatcagctacgacccgcgcgacctg
cttgccgctggtctctatcagctggtgccgaacccctatggcgacgtggtcgtaaaggcc
tatgacgtcagcgaaaaattgatgacgacctatgttcaggcgaacatcgaccacgaaatg
gggtcgtcgctgctgaccggcaacatcggcgtgcaggccatcttcaccgaccagaattcg
aacggcgcgagtgcgtccttcatcggcaccaaccccaacgaatcgcccaatatccagggc
attccgcagcgtcgcagcagcgactatgtcgacgtgctgcccagcctgaacctgtcgctg
cgcacggcgagcgatttcgtgatccgcttcagcgcggcgcgcgagatcatccgcccgcgg
ctcgacgacatgcgcgcctcgctgagctatgggacgacggtgggcgatccgggcggcatg
acctgtccccccggccgcctgtgcgcggtcgtgcgcggcggagcgggcaatccggatctg
cgtccctggcgcgccaacgccgtcgacctgaccttcgagaaatatttcgggtcgaagggc
tatctggcgctccagctcttctacaaggatctgaagagctatatctataatcaggacatt
ccgttcgacttcaccggctacccgatcgcgcccgtgggcaatgacgcgaacggcaacccg
atcatcgtcaattacatgggcaccgtgaacgcgccgatcaacggcgagggcggcgagctt
tatggcgccgaagtcgcgggcacgctgcccttcggcgaactggtcggcgcgctcgacggc
ttcggcgtaacgggcggcgcttcctataccaagacgaagatcgcgccgacccccggcgcg
ccggccgaggacatccccggctattccaaatgggtcgcgaacggcaccatcttctttgaa
aaatggggcttcaacgcgcgcgccagcgcacgttaccggtcgagcttcgttggcgaactg
tcgggcttcggcggcaatcgtgtgcgccgccgcgcgcggccggagacgatcatcgacgcg
cagatcggctatgacttccagccgggcagcgcgctcgaaggcctgtcgatctttgttcag
ggtcagaatctgaccgacgaacccttcgtcaccgacgatccgcgcgatgcgcgcgcggtg
atcgattatcagatttacggccgccgcttcctcgcgggcgcgaccttcaaattctga
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