Sphingopyxis sp. FD7: SPYCA_0391
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Entry
SPYCA_0391 CDS
T10393
Name
(GenBank) conjugal transfer relaxase TraA
Organism
spfd Sphingopyxis sp. FD7
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Gene cluster
GFIT
Motif
Pfam:
MobA_MobL
AAA_30
AAA_19
Viral_helicase1
PIF1
AAA_11
SH3_13
TraI_hel_assoc_N
AAA_22
Herpes_Helicase
AAA_16
SLFN-g3_helicase
Helicase_RecD
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
BBB11133
UniProt:
A0A2Z5UJJ6
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Position
422029..424914
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AA seq
961 aa
AA seq
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MAIFHLSVKVISRSSGRSAVAAAAYRGAERLHDERLDRDHDFTNKDGVVHSEVLLPEGAP
EEFADREKLWNAAEAAEKRKDAQLSREVEFAIPRELTKEQGVELAREFAEAEFVEKGMIA
DLNVHWDIGAGDQPKPHAHVMLTMREVGKDGFGAKVREWNKAELVEQWRERWADHVNQRL
AELDIDARIDHRSLEAQGIALEPQDKIGPAASRMGVRGLEAERIEEHRAVAQRNGERIIA
NPAVALDAITHGQATFTTRDLAMFVHRHSDGKEQFDLAMSAVRGSSDLIALGKDGRGEDR
FTSRQMIETEQRLGRASELLAERERHQVEDRGREGALARAAERGLVLSGEQRAAFDHVTD
NRGLSVVVGYAGTGKSAMLGVAREAWESAGYTVRGAALSGIAAEGLEHGSCIASRTIASL
EHQWGQGREQLTSRDVLVIDEAGMVGTRQMERVLSHAADAGAKVVLVGDPQQLQAIEAGA
AFRAIHERHGGVEISEVRRQHEGWQQDATRHLATGRTGLAIQDYGERGIIHAGETREAAR
GELIERWDRDRQASPGDTRIILTHTNDEVRELNDAARGKLRANGELGNEVTICAERGERL
FASGDRIMFLRNERGLGVKNGSLGTIEQVTPQRVAVRTDDGRNVAFDTKDYAHLDHGYAA
TIHKAQGMTVDRTHVLATPGMDSHGAYVAMSRHRDGLALHYGRDDFADQSKLVRTLSRER
GKDMASDYKPEQQFAERRGITFRERIVEIARQLPERAKSIFSGFRPLANRLEALPTEQVG
LSDQRRAVERYARAAADIGQMREQGLPILPHQRDALEKAGKALDAIRPHGTADLTSALQR
QPSLARDAADGRSQGAIRAMQLEAEIRVNPAQRADRFVSDWQRIGQARQAMQRDGDSKGV
QSLTNRMTDMAKGLERDAQVESLLRARTRELGIKTELGRDLARDLAASISMERSRSIGLG
L
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcttccatctctccgtcaaagtcatcagccggtcgagcgggcgcagcgccgtg
gccgccgcagcctatcgcggggctgagcggctgcacgacgaacggctcgaccgcgatcat
gacttcaccaacaaggacggggtcgtccattccgaagtgctgctgccggaaggcgcgccg
gaggaattcgccgaccgcgaaaaactctggaacgcggccgaagccgccgagaaacgcaag
gacgcgcagctttcccgcgaggtcgaattcgccattccgcgtgaacttaccaaggaacag
ggcgtcgagctggcgcgggagtttgccgaggcagaattcgtcgaaaagggcatgatcgcc
gatctcaacgtccattgggatattggcgcaggcgaccagcccaagccccatgcccatgtc
atgctcaccatgcgcgaagtcggcaaagatggcttcggcgcgaaggtgcgcgagtggaac
aaggcggagttggtcgagcaatggcgcgaacgctgggccgatcacgtcaaccagcgcctt
gccgaactcgatatcgatgcgcggatcgatcaccgcagcctggaggcgcagggcattgcg
ctggagccgcaagacaagatcggtcccgccgcatcgcgcatgggggtgcgcgggcttgag
gccgaacggatcgaagagcaccgcgccgtcgcgcagcgcaatggcgaacggatcatcgcc
aatcccgctgtcgcactggatgcgatcacgcacggccaggccaccttcacgacacgcgat
cttgccatgttcgtgcatcggcacagcgacgggaaggagcagttcgatttggcgatgagc
gcggtgcgcggatcgtccgacctgatcgcacttgggaaggacggtcgcggcgaagaccgg
ttcacatcgcgccagatgatcgagaccgaacagaggcttgggcgcgcatcggagttgctg
gccgaacgcgagcggcatcaggtcgaagatcgtggccgggaaggagcgctggcgcgcgcg
gcggagcgcgggctggtgctatccggcgagcagcgcgcggcgttcgatcatgtgaccgat
aatcgcggcctcagtgttgtcgtcggctatgccgggaccggcaagagcgcgatgctgggc
gttgcgcgcgaggcttgggaaagcgcgggctatacagttcgcggcgcagcactatccggc
attgcagccgagggcttggaacacggttcgtgtattgcatcacgcacgatagccagcctt
gagcaccagtggggccagggccgcgaacagctcacttcgcgcgacgttctggtgatcgac
gaggcaggcatggtcggcacgcgccagatggagcgcgtgctctcccatgccgccgatgct
ggcgcaaaagtggtgcttgttggcgacccgcagcagcttcaggccatcgaagccggagca
gcctttcgcgcgatccatgaacggcacggcggcgtcgaaatcagcgaagtgcgccgccag
cacgaaggctggcagcaggatgccacgcggcaccttgccacggggcgcaccggacttgcc
attcaggactatggcgaacgcggcataatccacgcaggtgagacgcgagaagctgcacgc
ggcgagctgatcgagcgctgggatcgggaccggcaggccagccccggcgatacgcgcata
atcctcacccataccaatgacgaagtgcgcgaactcaatgacgcggcacgcggaaagctg
cgcgctaatggcgagttgggcaatgaagtgaccatctgcgccgagcgcggcgagcgtctg
ttcgccagcggcgaccgcatcatgttcctgcgcaatgagcggggcctgggcgtcaagaat
ggctcactgggcaccattgagcaggtgacgccgcagcgcgtggccgtgcgcaccgacgat
ggccgcaacgtcgccttcgacacaaaagactatgctcacctcgatcatggctacgccgcg
acgatccacaaggcgcagggcatgacagtggaccgcacacatgtgctggcaacgccgggg
atggacagccacggggcctacgtcgcgatgtcccgccaccgtgatggccttgccctgcat
tatgggcgcgacgacttcgccgatcagtccaaacttgtccgcacgctcagccgcgagcgc
ggcaaggacatggcgagcgactacaaacccgaacagcaattcgccgaacggcgcggcatc
accttccgcgaacgtatcgtggagatcgcccggcaattgccggaacgggcgaagtcgatc
ttctcaggcttccgtccgctggccaaccggctcgaagcgctgcccaccgaacaggttggt
ctttccgatcagcgccgggccgttgaacgctacgctcgcgccgccgccgatatcggacaa
atgcgcgagcagggattgccgatcctgccacaccagcgcgacgcgctggagaaggccgga
aaggcgctcgacgcaatccggccccatggcacagccgatctcaccagcgccttgcagcgc
cagccctcgttggcccgtgatgccgccgatggtcgcagccagggcgcgatccgggccatg
cagctcgaagctgaaatccgcgtcaatccagcgcagcgcgcagaccgctttgtcagcgac
tggcagcgcatcgggcaggcgcgccaggcgatgcagcgcgatggcgacagcaagggcgtg
caaagcctcaccaaccgcatgacggacatggcgaaggggctggagcgcgacgcgcaggtt
gaatccctgctgcgcgctcgcacccgcgaacttggcatcaagacagaactcggtcgcgat
ttggcccgcgaccttgccgcttccatctcgatggagcggagccggtcaatcggtctgggc
ctgtag
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