Sphingopyxis sp. FD7: SPYCA_0405
Help
Entry
SPYCA_0405 CDS
T10393
Name
(GenBank) peptidase M22
KO
K14742
tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
Organism
spfd Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spfd03016
]
SPYCA_0405
Transfer RNA biogenesis [BR:
spfd03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SPYCA_0405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TsaD
Motif
Other DBs
NCBI-ProteinID:
BBB11147
LinkDB
All DBs
Position
436930..437559
Genome browser
AA seq
209 aa
AA seq
DB search
MSDERTLVIDSASEACSVALVAGGRVVDFRHEVIGRGHAERLVPLIAALADGGRADAIAV
GCGPGSFAGVRIGVAAARALALGWQVPAHGFSTLALVAAAAADAIGEAGGALVVMEGGHG
QWFVQPFAGDLSPRAEARSLLPDAAVALGDSLVVGNRAEAFVARRGTTGRALTLLPDARA
FLRLPRAALIGPPSPVYGRAPDARPMSGA
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgacgagcgaacgctcgtcatcgacagcgccagcgaggcctgctcggtcgcgctg
gtggcgggcgggcgcgtcgtcgactttcgccatgaggtgatcgggcgcggccatgccgag
cggctcgttccgttgatcgccgcgcttgccgacggcgggcgcgccgatgccatcgcggtc
ggctgcggccccggcagctttgccggcgtgcggatcggcgtcgccgccgcgcgcgcgctc
gcgctcggctggcaggtgccggcgcatggcttttcgaccctcgcgctcgttgccgccgcg
gcggccgatgcgatcggcgaagcgggcggcgcgcttgtcgtgatggagggcggccacggc
caatggttcgtccagcctttcgccggcgacctgtcgccgcgcgccgaggcgcgctcgctg
ctccccgacgcggcggtggcgctgggcgattcgctggtcgtcggcaatcgcgccgaggcc
ttcgtggcgcggcgcgggacgacggggcgcgcgctgacgctactgcccgacgcgcgcgcc
tttctgcgcctgccgcgtgccgcgctgatcggcccgccgagtcccgtctacggccgcgcg
cccgacgccaggccgatgagcggcgcatga
DBGET
integrated database retrieval system
