Sphingopyxis sp. FD7: SPYCA_0410
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Entry
SPYCA_0410 CDS
T10393
Name
(GenBank) dimethylallyladenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
spfd Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spfd03016
]
SPYCA_0410
Enzymes [BR:
spfd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
SPYCA_0410
Transfer RNA biogenesis [BR:
spfd03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
SPYCA_0410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
BBB11152
UniProt:
A0A2Z5UVV2
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Position
439906..441243
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AA seq
445 aa
AA seq
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MKSDAPKTFHVKSFGCQMNVYDGERMAEMLGAEGYVPAADGADADLVVLNTCHIREKAAE
KVYSDIGRLKRADGSTPTIAVAGCVAQAEGAEIARRAPSVDVVVGPQAYHRLPELIARAE
RGEKAIDLDMPLESKFGALPKRAGGQRPTAFLTVQEGCDKFCTYCVVPYTRGAEISRPFA
DLIAEARALIAGGVREITLLGQNVNAWDGEDDRGRAIGLDGLIRALAKEDGLERIRYTTS
HPGDMTDGLIAAHGEVDKLMPFLHLPVQAGSDRILAAMNRSHSVESYLKVIERVREARPD
IAISGDFIVGFPGESEEDFEATLAIVRATRYAMAYSFKYSRRPGTPAATMEDQVDEAVMN
DRLQRLQALLGEQQQAFNEATVGRATRLLLERKGKRDGQLIGKSPWLQSVHVTVPGLAIG
DMVDVRITSAGPNSLGAEALMEATA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccgacgcccccaaaacatttcacgtcaaatccttcggctgccagatgaacgtc
tatgacggcgagcgcatggccgagatgctgggcgccgaaggctatgtgcccgccgccgac
ggcgccgacgccgacctggtcgtgctcaacacctgccacattcgtgaaaaggcggccgaa
aaagtctattcggacatcggccgcctgaagcgcgccgacggcagcacgccgacgatcgcc
gtcgccggctgtgtcgcgcaggccgagggcgccgaaatcgcgcgccgcgcgccgagcgtc
gatgtcgtcgtcggcccgcaggcctatcaccgcctgcccgagctgatcgcacgcgcggaa
aggggcgagaaggcgatcgacctcgacatgccgctcgaaagcaagttcggcgcgctgccg
aagcgcgccggcggccagcgcccgaccgccttcctgaccgtgcaggaagggtgcgacaag
ttctgcacctattgcgtcgtcccctatacgcgcggcgccgaaatcagccgccccttcgcc
gacctgatcgccgaggcgcgcgcgctcatcgcaggcggcgtgcgcgaaatcacgctgctg
gggcagaatgtcaacgcctgggacggcgaggatgaccggggccgcgccatcggcctcgac
gggctgatccgcgctctggcgaaagaggatgggctggagcgtatccgctacaccaccagc
catccgggcgacatgaccgacgggctgatcgccgcgcatggcgaggtcgacaagctgatg
cccttcctccacctgccggtgcaggcgggcagcgaccgcatcctcgccgcgatgaaccgc
agccacagcgtcgaatcctatctgaaggtcatcgagcgcgtgcgcgaagcacgccccgac
atcgcgatctcgggcgacttcatcgtcggcttccccggtgaaagcgaggaagatttcgag
gcgacgctcgcgatcgtccgcgctacccgctatgcgatggcctacagcttcaaatactcg
cgccgccccggaacgccggcggcgacgatggaggaccaggtcgacgaagcggtgatgaac
gatcgcctccagcggctgcaagccttgctgggcgagcagcaacaggcgttcaacgaagcg
accgtcggccgcgcgacgcgcctgctgctcgaacgcaagggcaagcgcgacggccagctg
atcggcaaatcgccgtggcttcagtcggtgcatgtcaccgtgccgggcctcgcgatcggc
gacatggtcgatgtgcgcatcacgtccgcgggcccgaacagcctcggcgccgaagcgctg
atggaagcgaccgcctga
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