Sphingopyxis sp. FD7: SPYCA_0546
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Entry
SPYCA_0546 CDS
T10393
Name
(GenBank) AsnC family transcriptional regulator
KO
K05800
Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
Organism
spfd Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spfd03000
]
SPYCA_0546
Transcription factors [BR:
spfd03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
SPYCA_0546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
MarR
MarR_2
HTH_20
HTH_11
NirdL-like_HTH
HTH_IclR
HTH_Crp_2
TrmB
HTH_23
LexA_DNA_bind
HTH_Tnp_ISL3
DUF4423
FaeA
HTH_5
HTH_27
HTH_28
HTH_1
wHTH-PRTase_assc
Motif
Other DBs
NCBI-ProteinID:
BBB11288
UniProt:
A0A2Z5UJ60
LinkDB
All DBs
Position
complement(584436..584906)
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AA seq
156 aa
AA seq
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MSDLDPFEIRILRELQRDANQTTAEIAERVGLSVSPCWRRIDRLEREGFIRKRVAIVDRR
KVGLNAHVFAQVKLNAHGRANLDEFSAAIQDFPEVLDAYVLMGTTDFMLRIVARDIDAYE
RFFFDQLSKLPGVQEINSTVALSEIKATTQLPLDGE
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccttgatccattcgagataaggattctccgcgaattgcagcgcgacgcgaat
cagacgacggccgagatcgccgagcgcgtcggcctgtctgtatcgccctgctggcgccgc
attgaccggctggagcgcgaaggcttcatcaggaagcgggtggcgatcgtcgaccgccgc
aaggtcgggctcaacgcgcatgtctttgcgcaggtcaagctcaacgcgcacggccgcgcc
aacctcgacgagttcagcgccgcgattcaggactttcccgaagtgctcgacgcctatgtg
ctgatgggcacgaccgatttcatgctgcgcatcgtcgcgcgcgacatcgacgcgtatgaa
cgctttttcttcgaccagctcagcaagctgcccggcgttcaggaaatcaactcgaccgtc
gcgctctccgaaatcaaggcgacaacgcagctgccgctcgacggcgaatga
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