Sphingopyxis sp. FD7: SPYCA_0558
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Entry
SPYCA_0558 CDS
T10393
Name
(GenBank) isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
spfd Sphingopyxis sp. FD7
Pathway
spfd00020
Citrate cycle (TCA cycle)
spfd00480
Glutathione metabolism
spfd00720
Other carbon fixation pathways
spfd01100
Metabolic pathways
spfd01110
Biosynthesis of secondary metabolites
spfd01120
Microbial metabolism in diverse environments
spfd01200
Carbon metabolism
spfd01210
2-Oxocarboxylic acid metabolism
spfd01230
Biosynthesis of amino acids
spfd04146
Peroxisome
Module
spfd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spfd_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SPYCA_0558
09102 Energy metabolism
00720 Other carbon fixation pathways
SPYCA_0558
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SPYCA_0558
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SPYCA_0558
Enzymes [BR:
spfd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
SPYCA_0558
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Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
BBB11300
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Position
complement(597225..598439)
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AA seq
404 aa
AA seq
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MGKIKVANPVVELDGDEMTRIIWQWIRERLILPYLDIDLHYYDLGIEERDRTDDKITVEA
ANAIKKYGVGVKCATITPDEARVEEFGLKKMWKSPNGTIRNILGGVVFREPIVMKNVPRL
VPGWTDPIVVGRHAFGDQYKATDFRIPGPGKLRLVFEGEDGTLIDEEVFQFPSSGVAMGM
YNLDDSIRDFARASLNYGLAREWPVYLSTKNTILKAYDGRFKDIFEEVFQAEFKAKFDAL
GIVYEHRLIDDMVASALKWSGKFVWACKNYDGDVQSDTVAQGFGSLGLMTSVLMTPDGQT
VESEAAHGTVTRHYRMHQQGKATSTNPIASIFAWTGGLKHRGKLDDNAALVKFADDLEKV
CVATVESGKMTKDLALLIGPDQNWLTTEGFFEAIVENLDKKMGA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagatcaaggtagccaacccggtcgtcgaactcgacggcgacgaaatgacccgg
atcatctggcaatggatccgcgagcgactgatcctgccctatctcgacatcgacctgcat
tattacgatctcggcatcgaggaacgcgatcgcaccgacgacaagatcaccgtcgaagct
gcgaacgcgatcaagaaatatggcgttggcgtcaaatgcgcgacgatcacccccgacgaa
gcccgcgtcgaggagttcggcctcaagaagatgtggaagtcgccgaacggcacgatccgc
aacatcctgggcggcgtcgtctttcgcgaaccgatcgtgatgaagaatgtgccgcggctc
gtccccggctggaccgacccgatcgtcgtcggccgtcacgccttcggcgaccagtataag
gcgaccgacttccgcatccccggccccggcaagctgcgcctggtgttcgagggcgaagac
ggcacgctgatcgacgaggaagtgttccaattcccctcgtcgggcgtcgcgatgggcatg
tataatctcgacgattcgatccgtgatttcgcgcgcgccagcctgaactacggtcttgcg
cgcgaatggccggtatatctgtcgaccaagaacacgattctgaaagcctatgacggccgc
ttcaaggacattttcgaggaggttttccaggctgagttcaaggcgaagttcgatgcgctc
ggtatcgtttacgaacaccgcctgatcgacgacatggtcgcatcggcgctcaaatggtcg
ggcaagttcgtctgggcgtgcaagaattacgatggcgacgtccagtcggacacggtggct
cagggcttcggctcgctcgggctgatgaccagcgtgctgatgacccccgacggccagacc
gtcgagtccgaagccgcgcacggcaccgtcacgcggcactatcggatgcaccagcagggc
aaggcgacctcgaccaacccgatcgcgtcgatctttgcctggaccgggggcctcaagcac
cgcggcaagctcgacgacaatgcggcgctggtgaagttcgccgacgatctcgaaaaggtc
tgcgtcgcgacggtcgagagcggcaagatgaccaaggatctggcgctgttgatcggtccc
gaccagaactggctgaccaccgaaggcttcttcgaggccatcgtcgaaaatctcgacaag
aagatgggcgcttaa
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