Sphingopyxis sp. FD7: SPYCA_0592
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Entry
SPYCA_0592 CDS
T10393
Name
(GenBank) Orn/DAP/Arg decarboxylase 2
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
spfd Sphingopyxis sp. FD7
Pathway
spfd00300
Lysine biosynthesis
spfd00470
D-Amino acid metabolism
spfd01100
Metabolic pathways
spfd01110
Biosynthesis of secondary metabolites
spfd01120
Microbial metabolism in diverse environments
spfd01230
Biosynthesis of amino acids
Module
spfd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SPYCA_0592
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SPYCA_0592
Enzymes [BR:
spfd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SPYCA_0592
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BBB11334
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Position
633388..634617
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AA seq
409 aa
AA seq
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MKPHGPIPPGFRADPDGMLLIGGDRAESLADAAGDTPLFVYDSAMLSARVAEWRAAMPAA
VQLHYAMKANPYPPLLAFMGGLVDGFDVASGGELKAALASGMAAEHISFAGPGKRDRELE
AAMVAGATINLESAGEAERALAIADHLGATPRLAVRVNPDFDLKGSGMKMGGGAKPFGVD
TAAVPALVRRLIDAGADWQGFHIFAGSQALDAAAIAETQAQTVALAARLADAIGAAPPLV
NLGGGMGVPYFPGDTAVDAAAVGEALGATLAARGAVLAESRFAMELGRWLVAEAGVYLTR
IVDRKVSHGETFLVTDGGLHHQLAASGNFGTVIRRNYPIAVAGAFGREAVETVSVVGCLC
TPLDRLGDQVALPRAGVGDLIAIFQAGAYGASASPAAFLGQGPAREMLV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgcacgggccgatcccgcccggtttccgggccgatcccgacgggatgctgctg
atcggcggcgaccgcgccgaatcgctcgccgacgcggcgggcgacacgccactgttcgtc
tatgacagcgcgatgctgagcgcgcgcgtcgccgaatggcgcgcggcgatgcccgccgcc
gtgcagcttcattatgcgatgaaggccaatccctatccgccgctgctcgccttcatgggc
gggctggtcgacgggttcgatgtcgcgtcgggcggcgagctcaaggccgcgctggcgagc
gggatggcggccgagcacatcagcttcgccgggccgggcaagcgcgaccgcgagctggaa
gcggcgatggtcgcgggcgcgacgatcaatctcgaatcggcgggcgaggcggagcgcgcg
ctggcgatcgccgaccacctcggcgcgacgccgcggcttgcggtgcgcgtcaatcccgac
ttcgacctcaagggatcggggatgaagatgggcggcggcgccaagcccttcggggtcgac
acagccgcggttccggcgctcgtccgccgcctgatcgacgcgggcgccgactggcagggc
tttcatattttcgcgggatcgcaggcgcttgacgccgccgccatcgccgaaacacaggcg
cagacggtcgcgctcgcggcgcggctcgccgacgcgatcggcgccgcgccgccgctcgtc
aacctgggcggcgggatgggcgtgccctatttccccggcgatacggcggtcgatgccgca
gcggtgggagaggcgctcggcgcgacgctcgccgcgcgcggcgccgtgctggcggagagc
cgcttcgcgatggaattggggcgttggctcgtggcggaggcgggcgtctatctgacgcgc
atcgtcgaccggaaggtcagccacggcgaaaccttcctcgtcaccgacggcgggctgcac
caccagcttgccgcgagcggcaatttcggcaccgtcatccgtcgcaactatccgatcgcg
gtggccggcgcgttcggccgcgaagccgtcgagaccgtctcggtcgtcggttgcctctgc
accccgctcgaccggctgggcgaccaggtcgcgctgccgcgcgccggggtcggcgacctc
atcgcgatctttcaggcgggggcctatggcgccagcgccagcccggcggcgtttctgggg
cagggaccggcgcgcgagatgctcgtatag
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