KEGG   Sphingopyxis sp. FD7: SPYCA_0662
Entry
SPYCA_0662        CDS       T10393                                 
Name
(GenBank) glycine dehydrogenase subunit 1
  KO
K00282  glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
Organism
spfd  Sphingopyxis sp. FD7
Pathway
spfd00260  Glycine, serine and threonine metabolism
spfd00630  Glyoxylate and dicarboxylate metabolism
spfd00670  One carbon pool by folate
spfd00785  Lipoic acid metabolism
spfd01100  Metabolic pathways
spfd01110  Biosynthesis of secondary metabolites
spfd01200  Carbon metabolism
Module
spfd_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:spfd00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    SPYCA_0662
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SPYCA_0662
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    SPYCA_0662
   00670 One carbon pool by folate
    SPYCA_0662
Enzymes [BR:spfd01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.4  With a disulfide as acceptor
    1.4.4.2  glycine dehydrogenase (aminomethyl-transferring)
     SPYCA_0662
SSDB
Motif
Pfam: GDC-P Cys_Met_Meta_PP Aminotran_1_2
Other DBs
NCBI-ProteinID: BBB11404
UniProt: A0A2Z5UJ31
LinkDB
Position
708227..709585
AA seq 452 aa
MRYLPLTPDDRAAMLGVIGASSIDELFADVPVEARLDGPIAGLPMRASELAVERHMGALA
RRNRAAGDGPFFLGAGAYRHHVPASVDHLIQRGEFLTAYTPYQPEIAQGTLQMLFEFQSQ
VARLFGADVANASMYDGSTACWEAIVMARRITRRSKALLSTGLHPHYRSVARTMAKYTRD
MLVDGDPALEAGTDWVALAGAVDEETSCVVVQYPDILGRIDDMTTLAEACQAAGALLIAV
VTEPVALGLIKSPGEMGADIVVGEGQSLGVGLQFGGPYVGLFACKSKYVRQMPGRLCGET
VDANGKRGFVLTLSTREQHIRREKATSNICTNSGLCALAFSIHMTLLGEAGLRHLAAINH
GRAKGAAAELAKVPGVSVLNDSFFNEFTLLLPVAARPVVHKLAEMDILGGVSLGRLYPDN
DGLANGLVVAVTETVTEEDIAAFAAALKEVLA
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgcgttatctcccgctcacccccgatgaccgcgcggcgatgctcggcgtcatcggcgcg
tcgtcgatcgacgagctgttcgccgatgtccccgtcgaggcgcggctcgacgggccgatc
gccggcttgccgatgcgcgcgagcgagcttgcggtcgaacgccatatgggcgcgctcgcg
cgccgcaaccgtgccgcgggcgatgggcccttcttccttggcgcgggcgcctatcgccac
catgtgcccgccagcgtcgatcatctgatccagcgcggcgagtttttgaccgcctatacc
ccctatcagcccgaaatcgcgcagggcacgctccagatgctcttcgagttccagagccag
gtcgcgcggctgttcggcgccgacgtcgccaatgcgtcgatgtacgatggctcgaccgcc
tgctgggaagcgatcgtgatggcgcgccgcatcaccaggcgcagcaaggctttgctttcg
accggcctgcacccccattatcgcagcgtcgcgcgcacgatggcgaaatatacgcgcgac
atgctcgtcgacggcgacccggcgctggaggcggggaccgactgggtggcgctcgccggg
gcggtcgacgaggagacgagttgcgtcgttgtccaatatcccgacatcctcggccgcatc
gacgacatgacgacgcttgccgaagcatgccaggccgcgggcgcgctgctgatcgcggtc
gtcaccgaacccgtcgcgcttggcctcatcaagtcgccgggcgagatgggcgccgacatc
gtggtgggcgaagggcaatcgctcggcgtcggcctgcaattcggcgggccctatgtcggc
ctcttcgcgtgcaagagcaaatatgtccgccagatgccggggcgcctgtgcggcgaaacg
gtcgatgccaatggcaagcggggtttcgtgctgacgctttcgacgcgcgaacagcatatc
cggcgcgagaaagcgacgagcaatatctgcaccaattccgggctttgtgctctggctttc
agcatccatatgaccttgctcggcgaagccgggctgcgccatctcgcggcgatcaaccat
ggccgcgcgaagggcgctgccgccgagctggccaaggttcccggcgtgtcggtgctgaac
gacagcttcttcaacgagttcacgctgctgctgcccgtcgcggcgcggcccgtggtccac
aaactcgcggaaatggacatcctcggcggcgtgtcgctcggccgcctctatcccgacaat
gatggcctggcgaacgggctggtggtcgcggtgacagaaaccgtgaccgaggaagatatt
gccgcctttgccgcggcgctgaaggaggtgctggcatga

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