Sphingopyxis sp. FD7: SPYCA_0718
Help
Entry
SPYCA_0718 CDS
T10393
Name
(GenBank) methylase/helicase
KO
K26273
protein strawberry notch
Organism
spfd Sphingopyxis sp. FD7
Brite
KEGG Orthology (KO) [BR:
spfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spfd03036
]
SPYCA_0718
Chromosome and associated proteins [BR:
spfd03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
SPYCA_0718
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Motif
Other DBs
NCBI-ProteinID:
BBB11460
LinkDB
All DBs
Position
769592..773833
Genome browser
AA seq
1413 aa
AA seq
DB search
MSNTSLAFAFDPPCPPLVVTAAKAMALQLAAGSALSRSDINRIMTDHFGGTDALGAWSVR
DAYAALELAQVQHLQASDQVQPTSPIDEAEQFFSGLDARIPAQTNRSDEQIEWQQFATPP
RLAWLAARACALSVDELALEPSAGTGMLAVWAAKAGARLALNEISPLRRDCLTAVFPASR
VTGYDAELIEELLDPAIVPSVVLMNPPYSHGIERGHDGRTGARHLRSAWNRLAPGGRLVA
IMPEWFDCVRFLAGAKGPVSLRLNAAVERAFVRQGTGITTRLLVFDKAEGSNEPVAIRTN
DFPQLVDLVDALPARASLEAVPEQSSLPARAPFRLVAVPRRPLPIPARITPPASAIGSLT
YHSLETPARLAPQVGHYLPYRPSRIVIDGAAEHPTPLVESVAMGSIAAPMPEAVPQLPNG
LVAKGLLSAAQAETLIYAASAHARDLPGRFEPEDKGCSLKASAEGQTYRQGYFLGDGTGA
GKGRQVASVILDRWVRGERRHIWVSKNEALLEDARRDWAALGGLPIDIQPLASWKLGSPI
AMRDGILFVTYPTLRSGRNDATRLDQILAWAGEDFDGVIVFDEAHAMANAAGGEGSRGKV
KGSEQGIAGVRLQNLLPRARVLYASATGASDVNNLAYATRLGLWGPETAFANREAFVADI
RDGGIAAMELVARDLKSLGLYTARALSFAGVEYEILEHCLTEDQIAIYDAYAEAWAIIHA
NLREALEATRIVDGETGGTLNSGAKSAALSIFEGTKQRFFAQLLLSMKLPSLLPAIDTAI
ADGHAVVVQLVSTAEAMLDRRLADLSDEEREALEIDLSPREYVIDYLAKSFPVRLMAVFT
DENGNPRSEPMSDEYGAPVLCRSALAARDRMIEQLCALPPIATALDAIIERFGVEQVAEV
TGRTRRLIVGGDGRQKLQSRSPRAHVAETQAFMDGAKRILVFSDAGGTGRSYHADLAAKN
QARRVHFLLEPGWRADAAIQGLGRTNRTNQASAPLFRPVTTDVRGERRFISTIARRLDSL
GALTRGQRQTGGQNLFDPADNLESTYAKEALHRWFGLLFTGKLEAVSLGRFQELTGLRIE
APDGSMVDDLPSIQRWLNRILALPIALQNAIFDEFMGLVEARIDAARQAGTLDLGLETIA
VEDFTVLLDTLLRTDPASGATTHLLELEIARALKPLTLKRLEEIHGLTGQRQRPVRNARS
GRVALLVPARSILADDGTRVSRFELLRPLKRTHITEDQLAESSWEAISVDVFREAWAAEV
EEARTSHKRERLYLATGLLLPVWDKLPSDFVRVSRISAADGRSLLGREVPVHCVPELCRA
LGLEREQTLSADDVVQSVLATGRAMEFAGREQLMIKRSLVNGSQRLELTGWSAARLDWYK
AQGCFTEIIRYQTRLFVPIEGAASVIARLASSA
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacacttccctcgccttcgcattcgatccaccatgtccgccgcttgtcgtgacg
gcagccaaagcaatggcgttgcaattggcagcaggcagcgcgctttcgcgcagcgacatc
aaccgcatcatgacggaccacttcggcggaaccgatgcactcggggcatggtcagtccgt
gatgcttacgctgcgctcgagctggcgcaggttcaacacctgcaagcatcagatcaagtc
cagcccacgagcccgatcgacgaggcggaacagttcttcagcggtctcgatgcccgaatt
ccggcccagaccaaccgcagcgacgagcagatcgaatggcagcagtttgcaacgccgccg
cgccttgcctggctcgctgcccgggcttgcgcgctgagcgtcgatgagctcgcgcttgaa
ccctcggccggaacggggatgctcgcagtctgggcggcaaaggctggcgcgcgccttgcc
ctcaacgaaatctcgccgctgcgccgcgactgcctgactgctgtgttccccgcttcccgt
gtgactggatacgatgccgagctgatcgaagaattgctcgatccggccatcgtcccaagc
gtcgtgctcatgaacccgccgtattctcacgggatcgagcggggccacgatggccgcacc
ggggcgaggcatctgcgatcggcctggaaccggcttgcgcccggcgggcggcttgtggcg
atcatgcctgaatggttcgactgcgtgcggtttttggccggggcgaaagggccagtttcg
ctgaggctcaatgccgccgtcgaacgcgcgttcgtcaggcagggcaccggcattaccacg
cggctgttggtcttcgacaaggcggaaggctccaatgagcctgtcgctatccgcacaaac
gactttccccagttggtcgatctcgtcgatgctttgccggctcgcgccagcctggaggct
gttccagagcaatcgagccttcccgctcgtgcgccgtttcgcctggtggcggtgccgcgc
cggccgctgccgataccagccaggatcacgcctccagcctccgccatcgggtcgctcacc
taccattcgctcgaaacccctgcgcggcttgcccctcaggttggccactatctgccctat
cgcccgagcaggattgtgatcgatggcgcggccgagcatccgacgccgctcgtcgagtct
gttgccatggggtcgatcgccgcaccgatgcccgaagcggtgccgcagctgcccaacggt
ctggttgccaaagggctgctgtcggctgcccaggcagagactctgatctacgcggcaagc
gcccatgcgcgcgatcttcccggccggttcgagcccgaggacaagggctgttcgctcaag
gcctcagcggaaggccagacctaccggcagggctattttcttggtgatggaacgggcgcc
ggcaagggccgacaggttgcaagcgtcatccttgatcgctgggtgcgcggggagcgacgc
catatctgggtttcgaagaacgaggccctactggaagatgctcggcgcgactgggcggct
cttggcggtctcccgatcgacatccagcccttggcgtcctggaagcttggctccccaatc
gccatgcgcgacgggattctcttcgtcacctatccgacgctccgctcgggccgaaacgac
gcaacacgtcttgatcagatcctcgcttgggccggtgaagatttcgacggcgtgatcgtg
ttcgacgaggcgcacgcaatggccaacgccgctggcggtgaaggatcgcggggcaaggtc
aagggatcggagcaagggattgccggggtgcgtctgcagaacctcctgccccgggcaagg
gtgctctacgcctcggcaactggtgcgtccgacgtcaacaatctggcctatgcgacgcgc
ctcgggctgtgggggcctgagaccgccttcgccaatcgtgaggccttcgttgccgatatt
cgcgatggcggcatcgccgcgatggaactggtcgcgcgggacctcaagtcgctcggactc
tacacagcccgggccctttcattcgccggtgtcgaatatgagatcctcgagcattgcctg
accgaggatcagatcgcgatctacgatgcctatgccgaagcctgggcgatcattcacgcc
aacctgcgcgaagcgttggaggcgacgcggatcgtcgacggcgagaccgggggcacgctc
aactccggtgccaagtccgcagcgctgtcgatcttcgagggaaccaagcagcgcttcttc
gcgcagctgcttttatcgatgaagctccccagcttgctgcccgcgatcgatacggcgatc
gccgatgggcatgccgttgtcgtgcaactcgtctcaacggcagaggccatgctcgaccgg
cgacttgccgacctgtctgacgaggaacgcgaagctctcgagatcgatctgtccccgcga
gaatatgtgatcgactatctcgccaagagctttcctgtccgcctgatggcggtgttcacc
gacgaaaacggcaatcctcgctccgagccgatgagcgacgagtatggcgcgcccgttttg
tgtcgatcggcactcgccgcgcgcgaccggatgatcgagcagctctgtgccttgccgccg
attgctaccgcgctcgatgccatcattgagcgcttcggcgttgagcaggttgcagaggtc
actggtcgcacgcgtcggcttatcgttggcggcgacggtcgtcagaaactccaatcccgc
tcgccgcgcgcccacgttgctgaaacgcaggcattcatggacggtgccaagcgcatcctg
gtgttctccgatgccggggggacggggcgcagctaccacgccgatctggccgcgaagaac
caggcccgccgcgtccacttcctgctcgagccgggctggcgggctgacgccgcaatccag
gggctcgggcggaccaatcgcaccaatcaggcatcggccccgctgttcaggcccgtgacg
acagatgtgcgcggcgagcgtcgcttcatctcgacgatcgcgcggcgtctggacagcctt
ggtgctctgacgcgcgggcaacgccagaccggcggccagaacctcttcgatcccgccgac
aatctcgaaagcacctacgccaaggaggcgctccatcgctggttcggcctcttgttcacc
ggcaagctcgaagcggtcagcctcgggcgcttccaggagctgacaggcctgcggatcgag
gcgcctgacgggtcgatggtcgatgacctgccgtcgatccagcgctggctcaaccgcatc
ctggcgcttcccatagccctgcagaacgcgatcttcgatgagttcatggggctggtcgaa
gcgcgtatcgatgccgcccggcaggctggcacgctcgatctcggcctcgagaccatcgca
gtcgaggacttcactgtcctgttggacacgctgctgcgcaccgatccggcatcgggcgcg
acgacccatctcctcgaactggagatcgccagagccttgaagccgctcacgttgaagcgg
ctcgaggagatccacggcctcaccgggcagcggcaacggccggttcgaaatgctcgctca
ggccgggttgccttgctcgtgccggcccgcagtattcttgctgatgacggcacccgcgtt
tcccgcttcgaactgctgcgccccttgaagcggactcacatcaccgaggatcagctcgct
gagagcagctgggaggcaatttccgtcgacgttttccgtgaagcctgggcggccgaagtt
gaggaagcgcggaccagccacaagcgcgagcgcctctatcttgcgacgggcctcctgctg
ccggtctgggacaagctgccttcggatttcgtgagggtgagccgcatctcggctgccgat
ggccgctcgctcctgggccgtgaggttcctgtccattgcgtgcccgaactgtgccgggcg
ctgggactcgaacgggaacagacgctttccgctgatgatgttgtccagtccgtcctcgcg
acgggcagagccatggaattcgctggccgtgaacagctcatgatcaaacgcagcttggtc
aatggctcacagcgacttgaactcacgggatggagtgctgctcggctcgactggtacaag
gcccaaggctgctttaccgagatcattcgctatcagacccggctcttcgtaccgatcgag
ggcgcggcgagcgtgattgccagactggcatcatcggcatag
DBGET
integrated database retrieval system
